Tetraodon nigroviridis (spotted green pufferfish): GSTEN00012305G001
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Entry
GSTEN00012305G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00012305G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tng01002
]
GSTEN00012305G001
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00012305G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00012305G001
Peptidases and inhibitors [BR:
tng01002
]
Metallo peptidases
Family M1
GSTEN00012305G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00012305G001
Coactivators
SAGA/TFTC/STAGA complex
GSTEN00012305G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
GSTEN00012305G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1
HEAT_spiro
DUF8790
LST2_mid
Motif
Other DBs
NCBI-ProteinID:
CAF95588
UniProt:
Q4SUU4
LinkDB
All DBs
Position
undetermined
AA seq
1264 aa
AA seq
DB search
MNKKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRLKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQFWFPCVDSYSELCTWKLEFTVDASMVAVSCG
DLVETVYTHDMRKKAFHYVLTIPTAAPNISLAVGPFEIMVDPYMHEVTHFCLPQLLPLLK
HSMSFLHEIFEFYEEILTCRYPYSCFKTVFVDEAYVQVSAYASMSIFSTNLLHSAMIIDQ
TPLTRRCLAQALAQQFFGCFISRMSWADEWVLKGISGYIYGLYLKKTFGVNEYRHWIKEE
LDKIVDYELKMGGVLLHPTFSGGKEKDNPTPHLHFSIKHPHTLSWEYYKMFQCKAHLVMR
LIENRISMEFMLQVFNKLLSLASTASSQKYQSQMWSQMLVSTHGFLKSISNVSGKDIGPL
IKQWVDQSAVVKFFGSFAFNRKRNVLELEIRQDYTSPGTQKYVGPIKVTVQELDGSFNHM
LQIEENSLKHDIPCHSKSRRYSDQSPFHVCNVQYFNVFLNSFIVETFITLVVAAYPYNLS
QMLFLMVSFPRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADF
MWQYQLRYERDVVAQEEAISALEKFPTPASRLALTDILEQDQCFYKVRMQACFCLSKIAN
AMVSTWQGPPAMKILFTRMFCCKSCPNIVKTNNFINFQSYFLQKTMPVAMALLRDIQNLC
PKEVLNFILDLIKYNDNRKNKFSDNYYRADLIRALTNSLTPAISISNEVRTVDNLNPDVR
LILEEITRYLNMEKLLPSFRNTITVSCLRAIRELQKNGHIPSDASLFKSYAQYGHFVDVR
VAALEALVDYTRVDRSSAEMQWLLSLVQADPSHYVRHKILSMLCKNPPFTKAADSALCNE
ALVDQLWKLMNSGETQPQLFYSSLHHSPAETPKRTNPTTSWSERLPRGRSRPLGGRWTQR
PGLKEAEVSLDPGLLTSVAAAGSSRVSPLQPVAPGTSHDWRLRCDAVNLYYVMFGLTRPS
CLPLPELGLVLNLKEKKAVLNPTIKPELGPGALVETPASIGVHGVGISYSAVDEEPDPVS
LGVCGVGQPPQGLKRKAETPLGSPPEPGQVLQQQDDDARGGRFKIRFNTMEDEDIDMDTV
HDSQAFIHHHLNLLERPSTPGKEPPSVEQPMLSMPATPVPTFPKEGASSSSKHGAEHSHH
HHHHHEHKKKKKKHKHKHKHKHKHESKDKEKEKDRDRDRDRDSSRAFSNSPASGRSLRSP
SLSD
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagaaagataaaggatttgagagtccacgaccattcaaattgacccaccag
gtggtgtgcatcaacaacatcaactttcagaggaaatctgtgatcggttatgtggagctg
accattttccctacagtggtcaacctcaacaggctcaagctcaacagcaagcagtgccgc
atctacagagtccgagtgaatgaactcgaggctccgtttatttataatgaccccacgctg
gaggtgtgccaccatgagtccaaacagttctggttcccctgtgtggactcgtactcggag
ctctgtacgtggaagctggagttcactgtggacgcctccatggtggcggtttcctgcggc
gacctggtggagacggtttacacccatgacatgagaaaaaaggccttccattatgtcctg
accatccccactgcagcgccaaacatctcgctagccgtggggccctttgagatcatggtg
gacccttacatgcatgaggtgacacacttctgcctgccgcagctgctgccgctgctcaaa
cactcgatgtcgttcctgcacgagatctttgagttttacgaggagatcctgacgtgccgt
tacccttactcctgtttcaagaccgtgtttgtggacgaagcctatgtgcaggtgtctgcc
tacgcgtctatgagcattttcagcacaaacctgctccacagtgcgatgatcattgaccag
acgccgctgacccgccgctgtctcgctcaggctttggctcagcagttctttggctgtttc
atctccaggatgtcgtgggccgatgaatgggtgttgaaaggaatctccggctacatttac
ggcctctacctgaagaagaccttcggggtcaatgagtatcgacactggatcaaagaggag
ttggacaaaattgtggactatgaactaaagatgggaggagttctgctgcacccgactttc
agcggaggcaaagagaaggacaaccccactcctcaccttcacttctccatcaagcacccc
cacacgctgtcctgggagtactacaagatgttccagtgcaaagctcacctggtgatgaga
ctgatcgaaaacaggatcagcatggagtttatgctgcaggtttttaacaagcttctgagt
ctggccagcacagcctcgtcccagaaataccagagccagatgtggagccagatgctggtg
tccactcacggcttcctcaagtccatctccaacgtgtctggaaaggacatcggccccttg
atcaagcaatgggtagaccagagcgctgtggtgaaattctttggcagttttgccttcaac
aggaagaggaatgtgctggagctggagatccgtcaggactacacatcacctggtactcag
aaatacgtgggtcccattaaggtgacggtgcaggaactggacgggtcctttaatcatatg
cttcagatagaggagaacagccttaaacacgacatcccctgtcactccaagagcagacgg
tattcagatcaaagtccctttcatgtttgcaatgtgcaatattttaatgtattcctgaat
tcattcatagtggagactttcatcaccctggttgtggctgcttatccttataatctgtca
caaatgctttttctgatggtttctttccccagaaataagaaaaagaagatccccctgatg
aacggagaggaggtggacatggatctatcagccatggatgccgactctcctctgctgtgg
atccggatcgatccagacatgtccatcctcaggaaggtggagtttgagcaggcggacttc
atgtggcagtatcagctgcgctacgagagggacgtcgttgctcaggaggaggccatctcg
gctttggaaaagtttcccactcccgcctccagactggctctgacagacatcctggagcaa
gatcagtgtttctacaaagtgcgcatgcaggcctgtttctgcctgtcaaagatagcgaac
gccatggtgagcacctggcagggccccccagccatgaagatcctcttcactcgaatgttc
tgctgcaagagctgccccaacatcgtgaagaccaacaacttcatcaacttccaaagctac
ttcctccagaagacgatgcccgttgccatggcattactcagagacatccagaacctctgt
cctaaagaggttctcaacttcattctcgacctcatcaagtacaacgacaaccggaaaaac
aagttttcggataattactaccgggctgatctgatccgagcgctgaccaactctctgacc
ccggccatcagcatcagcaacgaggtgcggaccgtggacaacctgaaccccgacgtgcgt
ctcatcctggaggagatcacgcgatatctcaacatggagaagctgctgcccagcttccgg
aacaccatcaccgtcagctgtctcagagcaatccgtgagctccagaagaacggccacatc
cccagcgacgcgtctctcttcaagtcctacgcccaatacggacactttgtagacgtgcgg
gtggcagcgctggaggctttggtcgactatactcgcgttgacaggagttcggcagagatg
cagtggctgctgagcctggtccaggctgacccgtctcattacgtcagacacaagattctg
agcatgctctgtaagaatccacccttcaccaaggcagcggactcggctctgtgtaatgaa
gctctggtggaccagctgtggaagctgatgaactctggtgagacgcagccacagcttttc
tactcttccctgcaccactcccccgctgaaacgccaaagcgaacaaacccgaccacaagt
tggagtgaaaggctgccgaggggtcgttcccggccgttaggagggcgctggacgcagcgt
ccaggcctaaaggaagcagaggtttccctggacccaggtctgctgaccagtgtggctgct
gctggttcctccagggtgagcccgctccagcccgtcgcccccgggacgtcacatgactgg
cggctgcggtgcgacgcggtgaacctctactatgtgatgttcggcctgacccggccctcc
tgcctgcccctgccagaactgggcctggtcctcaacctgaaggagaagaaggcggtgctg
aaccccaccatcaagcccgagctgggcccgggggccctggtggagacgcccgccagcatc
ggcgtccacggcgtcggcatcagctactcggctgtggacgaagagccggacccggtttcg
ctgggggtgtgtggggtgggccagccgccccagggtctgaagaggaaggccgagaccccg
ctgggttcaccgccagaaccgggacaggtcctgcagcagcaggacgacgacgccagaggg
gggcgcttcaagatacggttcaacacgatggaggacgaggacatcgacatggacactgtc
cacgacagccaggccttcatccaccatcacctcaacctgttggagaggccctccacccca
ggcaaggagcctccgtccgtggagcagcccatgctgtccatgcccgccacgcccgtcccc
acctttcccaaagagggcgcctcgtcctcgtccaaacacggcgccgaacacagccaccac
catcaccaccaccacgagcacaagaagaagaagaagaaacacaaacacaagcacaaacac
aagcacaagcacgagagcaaggacaaggagaaggagaaggaccgggaccgggaccgggac
agggacagctcccgtgccttcagcaacagcccggccagcgggcggtcgctgcgctcgccg
tcactgtccgac
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integrated database retrieval system
