Tetraodon nigroviridis (spotted green pufferfish): GSTEN00012750G001
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Entry
GSTEN00012750G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00012750G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GSTEN00012750G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-ProteinID:
CAF95916
UniProt:
Q4STW6
LinkDB
All DBs
Position
undetermined
AA seq
674 aa
AA seq
DB search
MNGCGMRSSVGFLSRRELTGEPFIKEEFQRRRLAGCTSLYKKDMLGHFGCVNAIEFSNNG
GEWLVSGGDDRRVLLWHMEKAIHGRSKPVKLKGEHRSNIFCLAFDSSNAKVFSGGNDEQV
ILHDVERGETLNVFLHIDAVYSLSVNPVNDNVFASSSDDGRVLIWDTRGPPNAEPFCLAI
YPSAFHSVMFNPVEPRLIATANSKEGVGLWDIRKPRSSLLRYGGSMSLQSAMSVRFNSAR
THLHLAASPPAGPVHPVWVGRLQPLHVENPQRPGSRGPRARGQRRLHGAEGSSLHREPGP
LQPPQLHDLLLGRGEGHQGQWASRCLCSRRWDWAGCGGTQRVLVCLRQLWSPYRQPGSLG
DLEGLVEEKSRSLYTHEEYISLVLNSGSGLSHDYVSQSVQEDPRMMAFFDSLVRREIEGW
SSDSDSDLSEAIMQLHARGRRAARGGAAPAAATPGSAQQSDSDDSSSSSLAGADVSAGEE
GAEPRRQGRRRRRGSGFLDNEDSDSRPASDPSRSRRCSRRRTPAATRPYRWTTCPRRPRT
RSETLSRSNPAEARTRRVSARPSLNVPREAAEAGRGGRDRTGQGRGEGPRSGTARTAARR
AAARRPRRATPRPGAAAGPTGSTGLRAGTCPPPPTPRGRRPSRWGTPGRRGTKAWLRNGL
AWPRRRRSPTQRRS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaatggctgcggtatgcgctcctcggtgggctttctgtcccgcagagagctcactggg
gagccgttcatcaaggaggaattccagcggcgaaggctggcgggctgcaccagcctgtac
aagaaagacatgctcggacacttcggctgcgtcaacgccattgagttctccaacaacggc
ggcgaatggctggtgtcggggggagacgaccgccgcgtgctcctgtggcacatggagaaa
gccatccacggccgctccaagcccgtgaagctgaagggggaacaccgctccaacatcttc
tgcctggccttcgacagcagcaacgccaaggtcttctccggcgggaacgacgagcaggtg
atccttcacgatgtggagagaggagaaaccctgaacgtcttcctgcacatcgacgccgtc
tacagtttgtccgtgaatccggtcaacgacaacgtcttcgccagctcttcggatgacgga
cgcgtcctcatctgggacacccgcggaccccccaacgcagagcccttctgtctggccatc
tacccctccgccttccacagcgtgatgttcaaccccgtggagccgcgactgatcgccacc
gccaactccaaggagggcgtgggactgtgggacatccgcaaaccccgcagctccctgctg
cgttacggaggcagcatgtccctgcagagcgccatgagcgtccgcttcaacagcgcccgg
acccacctgcatctcgctgcttcgccgcctgctgggccagtacatcctgtctgggtcgga
cgacttcaacctctacatgtggaaaatccccaaagacccggaagcagggggccccgggcg
cgtggtcaacggcgccttcatggtgctgaagggtcatcgctccatcgtgaaccaggtccg
cttcaacccccacagctacatgatctgctcctcgggcgtggagaaggtcatcaaggtcag
tgggcgtccagatgtttgtgcagcagacgctgggactgggccgggtgtggggggactcag
cgtgtcctggtgtgtctccggcagctgtggagcccctaccggcagccgggcagcctgggc
gacctggagggcctggtggaggagaagtcgcggagcctgtacacccacgaggagtacatc
agcctggtgctgaacagcggcagcggcctgtcgcacgactacgtcagccagtccgtccag
gaggacccgcgcatgatggccttcttcgactcgctggtgcggcgggagatcgagggctgg
agctccgactcggacagcgacctgagcgaggccatcatgcagctgcacgcccgagggcgc
cgcgccgcccgggggggggcggctcccgccgccgccacaccggggtccgcccagcaaagc
gactcggacgactcctcgtcctcgtctctggccggagccgacgtctctgcgggggaggag
ggggcggagccgaggaggcagggccggcgtcggaggcgcggctcgggtttcctggacaac
gaggactcggactccaggccggcgagcgacccgagtcggtccaggcgctgttctcggcgg
cggactcctgcagctacccgtccatatcggtggacgacgtgtccacgtcgtcctcggacg
aggagcgagactctctccagatcaaacccggcggaggcgaggacgaggcgcgtctcagcc
cgtcccagtttaaatgtcccccgagaggccgcagaagcgggacgaggggggcgggaccga
acgggacaaggccgcggagaaggcccccggtcggggacggctcggacggcggcgaggcgc
gcagcagctcggcgtccccgcagagccacgcccagacccggcgcggccgcggggccaacg
ggcagcaccggactgagggcgggaacctgtccgcctcctccgacgccgagggggaggcgg
ccgtcccgctgggggacgccaggccgcagagggacaaaggcctggctcagaaacggactc
gcgtggcctcggaggaggaggagcccaactcagagaagaagctga
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