Tetraodon nigroviridis (spotted green pufferfish): GSTEN00012759G001
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Entry
GSTEN00012759G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13176
THO complex subunit 7
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00012759G001
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00012759G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00012759G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00012759G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GSTEN00012759G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GSTEN00012759G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
OVT1
MAP65_ASE1
Terpene_synth_C
Suppressor_APC
DASH_Dad2
UPF0193
CENPH
Peptidase_S46
PCRF
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
CAF95921
UniProt:
Q4STW1
LinkDB
All DBs
Position
11
AA seq
112 aa
AA seq
DB search
QNITSAHEKIAECKKEIQKAKRIRKNRQEYDALAKVIQQHPDRHDTLRQLESLDKELQHL
SHIKENVDAKLELRKKQFHVLLTTIQELQQTLENDEKSDDDNNQESPVEIGE
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
caaaatattacatctgctcatgagaagatagcagagtgcaagaaagaaatacaaaaagcc
aaacgaatacgaaagaatcggcaagaatacgatgctttagcaaaagtaatccagcaacac
ccagatcgccacgatacactgaggcagttggagtcgcttgataaagaactccagcatttg
tcacacatcaaggagaatgtcgatgcaaagctggaattgaggaagaagcagttccatgtg
ctactcactactatacaggaactacagcagactctggagaatgatgaaaaatcagatgat
gacaataatcaagaaagcccggtagaaattggtgaatga
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integrated database retrieval system
