Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013040G001
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Entry
GSTEN00013040G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04137
Mitophagy - animal
tng04140
Autophagy - animal
tng04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00013040G001
04137 Mitophagy - animal
GSTEN00013040G001
04148 Efferocytosis
GSTEN00013040G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00013040G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
GSTEN00013040G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CAF96125
UniProt:
Q4STA7
LinkDB
All DBs
Position
16
AA seq
410 aa
AA seq
DB search
MEKKAETASVKRGSTEQRKLRSRDAARYRRSQETEVFYELAHTLPLPRRVSTHLDKSAIM
RVSLSFLRMRKLLQTADGDKRESEEDDPMDGFYPQTLAGFIMVLTEEGDMIFLTENVNKY
IGIVQLELLGQSIYDFVHPCDQEELTDLLAPRPGLNKKQVKEMPSDINFFLRMKSTLTAR
GRTVNIKSAEWKVLHCTGHMCPFDAEVSSAARVMVLLCEPIPHPSSVEFPLDTYTFLTRH
SMDLRFTHCEGRVTELVGYKPDDLIGRSAFEFHHALDSDHISRSLRTLLSKGQVSTSRYR
FLANHGGFVWAETQATVLYNGKTSQPEAIVCLNFILRIRRRWIWRCWLRTYPWTMTSSSP
FSALCRRKKTKTLPILARSPPHSQRTTKAWMKDIFIVRPPDLSPPVSLLT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagcggagacggcgagtgtcaaacggggcagtacggagcagaggaaactg
cgctcccgggacgccgccagatacaggcggagtcaggagacggaggtgttctacgagctc
gcccacactctgccgctccctcgccgggtgtccacccatctggacaagtccgccatcatg
agagtctccctcagcttcctgcgcatgcggaagctcctccagaccgccgacggtgacaaa
agggagagcgaggaggacgatcccatggacggcttctaccctcagaccctggctggcttc
atcatggtgctgacggaggaaggagacatgatcttcctgacggagaacgtcaacaagtac
atcggcatcgtgcagctggagctgctgggtcagagtatttatgacttcgtccatccctgc
gaccaggaggagctgacagacctgctggctccacgtccaggtttgaataagaaacaggtg
aaagaaatgccaagtgacatcaacttcttcctgcggatgaagagcactctgaccgccagg
gggcgcaccgtcaacatcaaatcagccgagtggaaggttctccactgcacgggtcacatg
tgtccgttcgacgcggaagtgagctcagctgctcgagtcatggtgctgctgtgcgagccc
attcctcacccctccagcgtggagtttcccctcgacacctacaccttcctcacccgccac
agcatggaccttcgctttactcactgcgagggcagggtgacagagttggtgggatacaag
cccgacgacctcatcgggcgctcagcttttgagtttcaccacgcgctcgactccgatcac
attagcaggagcctccgcacgttactgtccaagggtcaggtgagcaccagtcgctatcgt
ttcctggccaaccacggcggctttgtctgggctgagacgcaggccaccgtcctctataac
ggcaagacctcccagcctgaagccatcgtctgcctgaacttcatactcaggatacggagg
agatggatttggagatgttggctccgtacatatccatggacgatgacttccagctcacct
ttctcggcactctgtcggaggaagaagacaaaaaccctgccaatcttagcccgctctcca
ccgcactcacagcgaacaacaaaagcttggatgaaggacattttcatcgtccgtccaccc
gatctgtcgccgcccgtctcccttctgacatga
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