Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013401G001
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Entry
GSTEN00013401G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00013401G001
03029 Mitochondrial biogenesis [BR:
tng03029
]
GSTEN00013401G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GSTEN00013401G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
GSTEN00013401G001
Mitochondrial biogenesis [BR:
tng03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
GSTEN00013401G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_LRR1
Pif1_2B_dom
PIF1
UvrD_C_2
Herpes_Helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAF96389
UniProt:
Q4SSJ3
LinkDB
All DBs
Position
15
AA seq
514 aa
AA seq
DB search
MVPAEDGAQLRCCVALEQLDASGQAARRQLIRRASVILGRNEFQEIVLRIHDGKVQQSYL
LKDFKLFTKFAKDGKSTVKLVPENIQVLISNCPPDQLSLFLRTLSVKHQAWQAGKPLSDR
EKLKAALPRSFEAISPLQQKDVQKANELRARAAPPGLQDRNNVAAPAGRGQQVKRYRKVL
PAEENRGFAPSKEHLRHSQHGSGRVPHRRNHVTQLRRSVRRSPEPFGGIQLIVCGDFLQL
PPVSKGKEKASFCFQARSWRKVIQVNMELTEVRRQTDQLFISLLQAVRVGRVTEDVTARL
LRSADHQIERDGILATRLCTHKDDVELTNENKLKQLPGSLHVFEALDSHPALVKAIDAHS
PVGRSIQLKVGAQVMLTKNLDVTRGLVNGARGVVVAFESGKHGLPHVRFLCGVTQALKPE
RWVFKSAGGTHLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARS
LEGLRVMDFDPRVVRADPDVLLFYKKLRKERLLT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtccccgcggaggacggcgcccagctgcgctgctgcgtggccctggagcagctggac
gcctccggccaggccgcgcgcaggcagctcatccgcagagcctccgtcatcctgggtcgg
aatgagttccaggagatcgtccttcggatccacgacgggaaggtccagcagagttacctc
ctgaaggactttaaactgttcaccaagttcgccaaagatgggaagagcactgtcaaactg
gtgccggagaacatccaggtgctgatctccaactgtcccccggaccagctcagcctcttc
ttgaggaccctgagcgtcaaacatcaggcctggcaggccggcaaacctctgagcgacagg
gagaagctgaaagcggctctgccccgcagctttgaggccatcagcccgctccagcagaag
gacgtccagaaggccaacgagctgagggcccgggcggctcctccggggctgcaggaccgg
aacaacgtggctgctcctgcagggaggggacagcaggtcaaaaggtacaggaaagtcctt
cctgctgaagagaatcgtgggttcgctccctccaaagagcaccttcgccacagccagcac
gggagtggccgcgtgccacatcggaggaaccacgttacacagcttcgcaggtctgtgagg
agatctcctgagccgtttggtggcatccagctgatcgtgtgtggcgacttcctccagctg
cctccggtctccaagggaaaggaaaaggccagcttctgtttccaggccaggagctggcgg
aaagtcatccaggtcaacatggagttaacggaagtgcgaagacaaaccgaccagttgttc
atctccctcctgcaggcggtgagggtgggcagggtgacggaggacgtcaccgccaggctg
ctgagaagcgccgaccaccagatcgagagggacggaattttggccacccggttgtgcacg
cacaaggatgacgtggagctcacaaacgagaacaaactgaagcagcttccggggtcgctc
cacgtgttcgaggctctggacagccacccggctctggtcaaggccatcgacgcccacagc
cctgtgggcagaagcatccagctcaaagtgggagctcaggtcatgctgacaaagaacctg
gacgtcacccggggtctggtgaatggagcacgtggagtcgtggtggccttcgagtctgga
aaacacggactcccacacgtgcgctttctgtgcggtgtcacacaagcgctgaaaccggag
cgctgggtgttcaagtccgccggtgggacccacctgagtcggcagcagctgccgctcaag
ctggcctgggccatctccatccacaagagccagggaatgacgctggactgcgtggaaatc
tcgctggctcgcgtgttcgagagcggccaggcctacgtggctctttcacgggctcggagc
ctggagggcctgcgggtgatggactttgaccccagagtggtcagggcagacccagatgtt
ctccttttctataagaaactgaggaaggagaggctgcttacg
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