Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013630G001
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Entry
GSTEN00013630G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00013630G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00013630G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00013630G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00013630G001
Coactivators
SAGA/TFTC/STAGA complex
GSTEN00013630G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
GSTEN00013630G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-ProteinID:
CAF96547
UniProt:
Q4SS35
LinkDB
All DBs
Position
11
AA seq
834 aa
AA seq
DB search
MASPTTSTDSTTGDDHDKTLVSSGLTALTGHSGKISSYPVRTLGESQTMNSHNAGSTTPT
EGSTETSEPGQKLMSKGLNSVVTQPAANSVIQTPVLNSQTVLQPMSQAAGPTVTLARPPM
QPERSGTKLNGNNNVSPGTSSQVGSATQTPAVNNNPPSNPMSTGAGSHVLKAEPPQAIQT
SSQLAVIPGAPRSLGTVAAVQGGVRALTPQVLAPRLPLTSPGQPSVHNIQIPPGMVLIQS
ESGQLLLIPQQALAQMQAQAQGGVAARTATPTNASPGQATGNTVVSKPVAPSTIIHPGCA
APTSLPVTTTLHRPPVLQSSAGASGTVPRTVNKTAGTTVTTIAMSKVSPASDTTCIYAHE
TIENVKKCKNFLSTLMKLASTGKQSPETAALVRELVKDLLDGKLEAEEFTSRLYKELNSS
PQPYLVPFLMRSLPALRQLTPDSTAFIQQSQLPQPASAPVTSASAISSTVVLSSPAPRLP
VPVSRPQFQPGVTKPGQSTSLVLQPQQQRAVLGPQVTLATTPMVTLRNPAPSHIVLGQQR
VQLKDLQPGSVRQPGSKQASAPALTPSQRNQLKEAGGTFKDDDDINDVASMAGVNLSEES
ANILATNSELVGVVTRSCKDEAFLSASLLQRRMLEIGRRFGVTDLGAEVVKYVSHAAQQR
LQSLLEKVSLVAQQRHISFKEDERYEQDGDVRAQLKFFEQLDQLEKQRKEEQEREILLKA
AKSRSRQEDPEQLRLKQKAKEMQQQELAQLRQREANLTALAAIGPRKKRKFLDSPSSSSA
EGSGPGPCLSSSAVSGSRPVRQRITRVNLRDLLFCLENERFTSRSHFLYKSFLK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccgacgaccagcacggactccacaacaggagacgaccacgacaaaacactt
gttagtagcggattaactgctctcactggtcactcggggaaaataagctcatatccagta
cggactttgggtgagagccaaactatgaactctcacaatgcaggaagcacgacccccact
gaggggtccacggagaccagtgagcccgggcagaaactgatgtccaaagggctgaacagt
gtggtaacgcagcctgcagcgaacagtgtgattcagacgcctgtcctgaactcacagact
gtccttcagcccatgagccaggcagccggacccactgtgacacttgccaggccacctatg
caaccggagaggtcgggcacgaaactgaacgggaacaataatgtgagccccggcacgtcc
tctcaggtgggaagcgccacgcaaacacctgcggtgaacaacaatccgccgagcaaccct
atgtcaacgggtgcagggtcgcatgttctaaaggcagagccgccccaagcaatacagacg
tcatcgcagctggctgtcattcccggcgctccgcgcagtctggggacggtggctgccgtc
caaggaggagtccgggccctgacacctcaagtgttggccccgaggcttcccctgacctct
ccaggacaaccaagtgtgcacaacatccaaatcccaccagggatggtgctgattcagagc
gagagtggacagctgctgctgattccccagcaggctctggcccagatgcaggctcaggcc
cagggaggcgtggcagctcgcaccgctacgccgacaaacgcgtcacctggccaggctact
ggaaacacagtggtcagcaaaccagttgcacccagcaccatcatccacccgggctgtgca
gctccaacatcccttcctgtgaccaccacccttcacagacctcctgtcctccagagctca
gcaggggcctcaggaacggtccccaggaccgtcaacaaaacagccgggaccacggttacc
acaatagcgatgagcaaagtaagtcctgccagtgacacaacctgcatctatgcacatgag
accatagagaatgtaaagaaatgcaagaactttttgtctacgctgatgaagttggcatca
acgggcaaacagtccccggagacggcagcactcgtgagagagctggtcaaggacctgctg
gacggtaaactggaggctgaggagttcaccagcagattatacaaagagctcaactcgtca
cctcaaccttaccttgtgcctttcctgatgcgaagccttccagccttaaggcagctcacc
ccagactccacagcctttatccagcagagtcagctcccccagccagcctcagctccagtc
acctctgcctccgccatttccagcacggtggtcctgagcagcccggctccacgcctccct
gttccagtcagcaggccccagttccagccaggagtcaccaaaccaggacagagcacttca
ctggttctccagccacagcagcagagagcagtgttgggtcctcaggtaaccttagcaacc
acccccatggtgaccctcaggaacccggcccccagtcacatagtgttggggcagcagcgg
gtccaacttaaagacctgcaaccaggttctgtgaggcaaccaggttctaaacaggcttct
gccccagctcttaccccctcacagaggaatcagctgaaagaggctggcggaacgtttaag
gatgacgatgacatcaatgacgtggcttccatggctggagttaacctttcagaggaaagc
gctaacatcctagcaaccaattctgaactagtgggcgtggtgacacgttcctgtaaagac
gaggctttcctttccgcttcactgctgcagaggagaatgctggagatcggcaggaggttt
ggcgtgaccgacctgggcgccgaagtcgtcaagtatgtttcccacgctgctcagcagagg
cttcagagtctgctggaaaaggtttccctggtggcccagcagaggcacatcagctttaag
gaggacgagcgctacgagcaggacggcgacgtccgggctcagctcaagttctttgagcaa
ctggaccagttggagaaacagcgaaaggaggagcaagagagagagatcctcctcaaggca
gccaagtctagatcccggcaggaggacccggaacagctgcgtctgaagcagaaggcgaag
gagatgcagcagcaggagctggctcagctgagacaaagggaggccaacctgacggctctg
gccgccatcggccccaggaagaagaggaagtttctggattctccatcctcttcctctgcg
gagggatcggggcccggtccgtgtctctccagcagcgccgtgtcgggctccaggcccgtg
cggcagcgcatcacacgcgtcaacctcagggacttgctcttctgcctggagaacgagaga
ttcaccagccgctcccatttcctctacaagagctttctcaag
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integrated database retrieval system
