Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013637G001
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Entry
GSTEN00013637G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14298
mRNA export factor
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00013637G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00013637G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00013637G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00013637G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GSTEN00013637G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-ProteinID:
CAF96553
UniProt:
Q4SS29
LinkDB
All DBs
Position
11
AA seq
479 aa
AA seq
DB search
MSLFGTNTGFGAGGTGVFGNTTTDSHNPMKDIEVTSPPDDSISCLAFSPPTIPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLGACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQKRGQPPHAFILFAFQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMM
SLQMPERCYCADVVGALPEDKKRFLKDNIALSLFDSVPDSPVQEYPMAVVATAERGLIVY
QLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF
TFKCHRSNGTNNTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD
QPITACCFNHNGNIFAYASSYDWSKVGGVQPARRSPQLSLVSFLSSYSYCLDLTSSGPRV
LQPPEKELHLPEECCRGAEATKQEMVREGIRHLQTWKLQTPDGLPHFLRLPPTLGGSPQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggacgaacacgggctttggcgctggtggcaccggcgtcttcggaaac
acaacgacagacagccacaatcccatgaaggatattgaagtaacctctcctccagacgac
agcatcagttgtttggcctttagccctcctaccattccagggaacttcctcattggagga
tcctgggccaatgatgtgcgatgctgggaggtgcaggacaacggtcagaccgtccccaaa
gcccagcagatgcacacgggtccggtgctgggtgcttgctggagcgacgacggaagcaaa
gttttcaccgcctcctgcgataaaacggccaagatgtgggatcttaacagcaaccaggcg
atgcagatcgcacagaaaagaggccagccgcctcacgccttcatcctgtttgccttccag
cacgacgggccgatcaaggccatccactggatcaaagcccccaactacagctgtgtcatg
actggcagttgggacaaaaccctgaagttctgggacactcgctctcctaatcccatgatg
tctctccagatgccagagagatgctactgcgcagatgttgtgggtgctctacctgaagat
aaaaagcgcttcctgaaggataatattgcgttgtccctgtttgattctgtgcccgactct
cccgtgcaggagtatcccatggcggtggtggccacagctgagaggggccttatcgtgtat
cagctggagaaccagccctcggagtttcgcaggatagattcgcctctcaaacaccagcac
cgctgtgtcgccatatttaaggacaagcagaacaaacctacgggttttgcactgggcagc
atcgagggtcgagtggccattcactacatcaaccccccaaacccagccaaagacaacttc
acctttaagtgccacaggtccaacggaactaacaacaccaccccacaggatatttatgct
gtgaacgccatctccttccaccctgtccacggcacgctggctaccgtgggctcagacgga
cgcttcagcttctgggacaaagacgcccgcaccaagttaaagacctcggagcagctggac
cagccaatcacggcctgctgcttcaatcacaacggcaacatctttgcatacgcctccagc
tacgactggtcgaaggtgggaggcgttcagcctgctcggcgttcgcctcagctctcgctt
gtttctttcctttcttcttattcctactgtctggatctgacctcctcagggccacgagta
ctacaacccccagaaaaagaactacatcttcctgaggaatgctgccgaggagctgaagcc
acgaaacaagaaatggtgagagaaggcatccgccatctgcagacgtggaagctgcagact
ccagatgggctgccccacttcctccgtctacctccgactctcggtggctctccacagtga
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