Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013687G001
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Entry
GSTEN00013687G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00013687G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tng04990
]
GSTEN00013687G001
Domain-containing proteins not elsewhere classified [BR:
tng04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
GSTEN00013687G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
CAF96590
UniProt:
Q4SRZ2
LinkDB
All DBs
Position
18
AA seq
315 aa
AA seq
DB search
MPLSVVLDGPAPWGFRMVGGKDFNQALTISRVTPGSKASAASLCPGDVILAIEGAPTKDM
LHCEAQNKIKESTHRLSLTIERNESRLWSPQVVDQGRAHPFKINLEAEHQEYKPIGTAHN
RKAQPFVAAANIDDKRQVVSATYNTPIGLYSSDNIQDAMEGQIRGLVHHRPESSRALTNI
EDSAVYQMLQKEQEEPHAPRQSGSFRALQDFIDSDGTRPIGTRTVKAPTIKQAPPTGNLQ
KLPICDKCGNGIVGTVVKARDKFRHPGCFVCSDCDVNLKQSGYFFVEGQLYCEAHARVRM
RPPEGHDLVATFPSA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccactcagcgtggtgctggacggtccggccccctggggcttccgcatggtaggcggg
aaagacttcaaccaggccctgaccatctccagggtcactcctggcagtaaggcgtcggcg
gccagcctgtgccctggggacgtcatcctggccatcgagggagcccccaccaaagacatg
ctgcactgtgaggcccagaacaagattaaggagtccacccaccggctgtccctcaccatc
gaaaggaacgaatccagactgtggtctccgcaggtggtggatcaaggcagagctcacccc
tttaagatcaacctggaagccgaacatcaggaatacaaacccatcggcaccgcccacaac
cgcaaagcccaacccttcgtcgccgcggccaacatcgacgacaagcgtcaggtggtcagc
gccacctacaacacgcccataggcctctactcctctgacaacatccaggacgccatggag
ggtcagatccggggcctggtccaccacaggcccgagagctccagagctttgaccaacatt
gaagattctgccgtgtaccagatgttacagaaggagcaggaggagccccacgccccccgc
cagtccgggtccttcagggccctgcaggacttcatagacagcgatggcactcgtcccatt
gggaccaggacggtaaaagcccccacaatcaaacaagctccgcccacaggaaacctccag
aaactgcccatctgcgacaagtgtgggaacggaattgtcgggacggtggtgaaagccagg
gacaagttccgccaccccggctgcttcgtgtgttccgactgcgacgtcaacctcaaacag
agcggctacttctttgtggaggggcagctctactgcgaggctcacgcccgcgtgcggatg
agaccccccgagggccacgacctcgttgccacctttccttctgcc
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