KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013713G001
Entry
GSTEN00013713G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00013713G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00013713G001
   04121 Ubiquitin system [BR:tng04121]
    GSTEN00013713G001
Spliceosome [BR:tng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    GSTEN00013713G001
Ubiquitin system [BR:tng04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    GSTEN00013713G001
SSDB
Motif
Pfam: SART-1 HIND HA
Other DBs
NCBI-ProteinID: CAF96607
UniProt: Q4SRX5
LinkDB
Position
18
AA seq 768 aa
MGSSKKHKEKSRDKETEDRRREHKKHRHKERERDAPERDGGRDRDRRKRSRSRDRSSRDS
RSKAAEKSSGEPRIKKERNDLGFDESNADVGPVSASGDASLSVEETNKLRAKLGLKPLEL
NESKKELGTKEEPILAEVINPVTIQQQKEMREKLAALKEKRIQNQKLGKVKTMAEDDWLD
DTSAWVEKSRKLEKEKEMAEKRAKLLEEMDQEFGVSSLVEEEFAQSKSNAYTSRELKGLK
VQHKVDSFAEGQTVILTLEDKGVLDEEEDVLVNVGLVDREKAEKNVELRKKKPDYNPYDD
EESVDDMVAFKRQSVLSKYDEEIDGEKKKSFRLSTGGVAHGEREKELQVMRDTLRSQAQS
LEMPTLAVASEYYTPQEMVGFKKTKRRVKKIRKKDRLTVADELHDDTRSSDFGSRTRGRG
RKQDGEGGAEVAEQGDGVPGAVPLQLSDDVRTAEMDMSDEEDFAAPEAVVLEEDEAEQEL
QKQLEKQRKLKQKQLLKDSGEKVAEQVQMISKTEKSNDPEKKNNIVFNATSEFCRTLGDI
PTYGLSGNREDQEDIMDFEQQEEKGEAGESDSDMDENVGWSTVNLDEEQKNTDFATASAT
ILDEEPIVNSGLGLRCCCARTKMQKVARVKAPKGALPNVNYCIEDKMGFDDKYSRREEYR
GFTQDFKEKDSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKKLEE
EALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggggtcttcaaagaaacacaaggaaaaaagtcgggacaaggagaccgaagatcgccgc
cgcgagcacaagaaacatcgccataaggagcgagagagagacgctcctgagcgagatgga
ggtcgagatcgggacagaagaaaacgctccaggtcgagagacagaagcagccgggacagt
cgcagcaaagctgccgaaaagagcagcggggagccgcgaatcaagaaagagagaaatgat
ttgggattcgacgaaagcaacgcggatgtgggccctgtgtctgcgagtggagacgcttcc
ctcagcgtcgaggagaccaacaaactcagagccaagctggggttaaagcctctggaatta
aatgagagcaagaaggagctgggcaccaaagaggagccgatcctggctgaagtcatcaac
cccgttaccattcaacagcagaaggagatgcgagagaagctcgccgctctgaaggagaag
cgcatccagaaccagaaactggggaaggtgaagaccatggcggaagacgactggctggat
gacacgagcgcttgggtggagaaaagcaggaagctggaaaaggagaaggaaatggcggag
aaacgggcaaaactcctggaagagatggatcaggagtttggtgtcagcagtctggtggag
gaggagtttgcacagagcaaaagtaatgcatacacgtcgcgagagctgaaaggtctcaaa
gttcagcacaaagtggattcctttgctgagggccagactgtcattctgaccctggaggac
aaaggcgtgctcgacgaggaggaagacgtgcttgtcaacgtggggctggtggacagggag
aaggcagagaagaatgtggagttgagaaagaaaaagccagattacaacccctacgacgac
gaagagagcgtggacgacatggttgcgttcaagcgccagtcggtgctgtccaagtacgac
gaggaaatagacggcgagaagaagaaaagtttcaggttgagcacgggcggcgtcgctcac
ggggagcgagagaaggagctccaggtcatgagggacacgctgcggagtcaggcgcagtcg
ctggaaatgccgacccttgccgtagcctcggaatactacacgccgcaggagatggtgggc
tttaagaaaacgaagcgacgcgtgaagaagatacggaagaaggacaggctgacggtggcg
gacgaactccacgacgacacccggagctctgattttggctcgaggacgaggggccgcggg
cgcaagcaggacggtgaaggcggcgctgaagtggcggagcagggcgacggtgtgccaggg
gctgtacctctccagctgtccgacgacgtcaggacagctgagatggacatgagtgacgag
gaagacttcgccgcgcccgaagcggtggtactggaagaggatgaggcagagcaggagctg
cagaaacagctggagaagcagaggaagctgaagcagaagcagctcctgaaggactctggg
gagaaggtggcagagcaggttcaaatgatcagcaaaacggagaaaagcaatgaccccgag
aagaagaacaacatcgtgtttaacgccacctcagagttctgccgaaccctcggggacatt
cccacttacggactgtccggtaacagagaggaccaagaggacatcatggattttgaacag
caagaggagaagggtgaggccggagagtcggactcagacatggacgagaacgtcgggtgg
agcacagttaacctggacgaagagcagaaaaacaccgatttcgccacagcctctgccacc
attttggacgaagagcccatcgtcaactctggcctcggcctgcgctgctgctgtgcaaga
acaaagatgcagaaggtggcccgcgtcaaggcccccaaaggcgctctgcccaacgtcaac
tactgcatcgaggacaagatgggcttcgatgacaagtacagccgcagggaggaatacaga
ggcttcactcaggatttcaaggagaaggacagctacaagcccgacgtcaagatcgagtac
gtggacgagtctgggaggaaactgacccccaaagaggccttcaggcagctctcgcaccga
ttccacggcaagggctctggaaagatgaagacggagaagaggatgaaaaagctggaggag
gaggcgctgttgaagaagatgagcagcagcgatactcctctcgggacagtggcgttgctt
caggagaagcagaagtcccagaaaacgccgtatatcgtgctcagtggaagcggcaagagc
atgaacgcaaacaacatcaccaaataa

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