Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014122G001
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Entry
GSTEN00014122G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00014122G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00014122G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
GSTEN00014122G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
PDZ
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-rbx1
TRAF3_RING
zf-RING_6
U-box
RING_XB3-XBAT31
zf-TRAF_2
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
CAF96913
UniProt:
Q4SR19
LinkDB
All DBs
Position
11
AA seq
566 aa
AA seq
DB search
MGFELDRFKGTVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVQQSSCPVKCQRIS
AKELNHVLPLKNLILKLEIKCDNHARGCDAVVKLQHLAEHAEMCEFSPVKCRNKGCSEVL
NLEGNGRSQAGDVRLQTALKAHNSALQCKLICLDREFKKQTIKANKREKATVAQLSAVHG
ELQMTALKYQKKFTEYSERIDSLTKTVAFSCKMQDWKIKTGEAKSVTVVLLREGGSLGFN
IVGGRPCSEDIDSISNEGIFVSKIVEKGPADKEGGLQIQDKVLEPRWVRKSTRVCFQADK
SSLTGLPPSILFSPLTQFHAEKPPHPEVCTKVVQPRRVSCEVTHGEPLNTSSLPAVAVGS
SHEDRDLLKPSQTALSDKKQAFVRRFIEFQPQPGSHLIVALLCFARLSRDGANRPQTVPT
VPPSRIPVPSGPAEVRPGRNQLLVLVGRSEDKLALVSSAGKKAGDVESAGVLMEEKEEEK
AEKGFGVGLGWVGAGVGSWGPHTGCRVLRKSCMDLFVLACWAPRVAFWPTHPPGVAANWL
FVEHSTVSLFPQLSAVTQTVSEEMLK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgcttcaaggggacagtggacccggattttaaatgcaacttg
tgcaataaagtgttggaggacccgctgactactccgtgcggtcacgtcttctgctccggc
tgcgtgctgccctgggtcgtccagcagagcagctgtcccgtcaaatgtcagcggatctcg
gccaaggagctgaaccacgtcctgccgctgaagaacctcatcctgaaactggagatcaaa
tgtgacaaccacgcgaggggctgcgatgcggtggtgaagctgcagcatctggccgagcat
gccgagatgtgcgagttctccccggtgaagtgtcggaacaaggggtgcagcgaggtgctg
aacctggagggcaatggacgctcacaggcgggagacgtgcgactacagaccgccctgaag
gcgcacaacagcgcgctgcagtgcaaactcatctgcctggacagagagttcaagaagcag
actattaaagccaacaagcgggagaaggctacggtggcgcaactttctgccgtgcacggc
gagctgcagatgacagctctgaagtatcaaaagaaattcaccgagtacagcgagaggatt
gactccctcaccaagaccgtggctttctcctgcaagatgcaagactggaaaataaaaacc
ggtgaagctaagagtgtgaccgttgtccttctgcgtgagggcggctctctgggttttaac
atcgtaggaggaaggccatgctcggaggacattgacagcatttcaaatgaagggatcttt
gtgtccaagattgtggagaaaggtccggctgacaaagaaggaggcctccagatccaggac
aaagttctcgagcctcgctgggtgaggaagagcacccgtgtttgctttcaagctgacaaa
tcctccctgacagggctgccaccaagcatcctcttctcccctttaactcagttccatgca
gaaaagccacctcaccctgaggtttgcaccaaggtggtgcaaccacggcgtgtgagttgc
gaggttacccacggtgagccactaaacacctccagcctccctgccgtcgcagtgggatca
agtcacgaagacagagacctgctaaaacccagccagacagcacttagcgacaagaagcag
gcctttgtcaggcgctttattgaatttcagccccagccaggcagccatcttattgtggcc
ctgctttgtttcgcccgcctgtcccgagacggggccaatcggccccagactgtgccgacc
gttccaccgagccgcattcctgtgcccagcggcccggctgaggtgagacctggccgtaat
cagcttctggtgctggtgggaagaagcgaagacaagctcgcccttgtttccagcgctggg
aaaaaagctggagatgtggagtctgcaggcgtattaatggaggagaaggaagaggagaag
gcggagaaggggtttggcgttggactggggtgggtcggtgctggagtgggctcgtggggg
cctcatactggatgtagggttttaaggaaaagctgcatggatttgtttgtgctggcctgt
tgggcccccagagtggcgttttggcccacgcaccctccaggtgttgcagcaaactggctt
tttgttgagcacagcactgtttctttgtttcctcagttgtctgcagttacacaaacagtg
tctgaggaaatgcttaagtga
DBGET
integrated database retrieval system
