Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014161G001
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Entry
GSTEN00014161G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11097
small nuclear ribonucleoprotein E
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00014161G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00014161G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00014161G001
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00014161G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
GSTEN00014161G001
Spliceosome [BR:
tng03041
]
Complex A
U1 snRNP components
Sm proteins
GSTEN00014161G001
U2 snRNP components
GSTEN00014161G001
Complex B
U1 snRNP components
GSTEN00014161G001
U4/U6.U5 tri-snRNP components
GSTEN00014161G001
Complex C
U2 snRNP components
GSTEN00014161G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GSTEN00014161G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-ProteinID:
CAF96946
UniProt:
Q4SQY6
LinkDB
All DBs
Position
11
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHMKTKNRKPLGRVMLKGDNITLLQSVSN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagaggacaaggacaaaaggtccagaaggttatggtgcagcccattaacctt
attttcaggtatttgcaaaatcgctctcgaatccaggtctggttgtacgaacaggtcaac
atgcggatagaaggctgcatcattggctttgatgagtacatgaacctagttcttgatgat
gccgaggaaatccacatgaagactaagaacagaaagcctttgggtagagtcatgttgaaa
ggagacaacatcaccctgctgcagagcgtgtccaac
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integrated database retrieval system
