Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014272G001
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Entry
GSTEN00014272G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
GSTEN00014272G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00014272G001
Membrane trafficking [BR:
tng04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
GSTEN00014272G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
RGS-like
PH_16
PDZ
PDZ_6
PDZ_2
Pept_S41_N_bact
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
CAF97027
UniProt:
Q4SQQ5
LinkDB
All DBs
Position
undetermined
AA seq
1444 aa
AA seq
DB search
MSLRQPTSTLDRLSSLTVGDSERRSSGAQQRDPSAELPAEGAGPGLIHRCVVVQKDHLGF
GFTVCGERVKLVQNVRAGGAAVKAGVQEGDRIIKVNGALVSTMSHQEVVKLIKSGPFVAL
TLQGPPPSTAALPLEPLPTDLTANQRASLSGEAPPSPPPPVPPGMGSIPSQRITGPKPLQ
DPEVQKHASEILRKMLEQEEAELQNLLEERKKNPSPSLDERIERARRRAHQVAIKIQQDQ
ESSRSEPVPGYVIAGRLSVDSSEGDVEVSVGVTDRYVSDTHPLTPPPPPPSRSSSSFPRL
ARVPTPPPRPSGPHSTDARTRTRPRQIRAQIIGPEEEYDDDYSYTFADVSGDLLSPAHLG
FPSIRTHSRFPSPLPKTDGPFQDIELLKLRPAHMTVFMRYIFTQLLDPNPLVAVLLSVEA
YLGSSSKEARALAPQICSHFLDPDAPLKIKAKEEFLSDIGATADGFSSFLDECQYYFQRC
DYASVLPSDSRLHAQEDIRGPLSELQQLVLPEIQDQIQDYRNKQMMGLGNLFGQEDLQPL
DGDPAKERQVVDKQVIALWEILSKHEEDRSSPLAWAVLLYLRHSGIKLRDSKVFPGLTTE
KEKWLAFLKTKKLSGIKKEKDGEDKKRNPILKYIAKPRTTSQSTFHVPLSPSEVRSGNVR
NIIQQFENHTEAGEEGGDAADAQRLSSSSLGEDSMDSPTVSVRLARSESLKAQGEGRRRG
AASGTESVPRSRSDVDMEDCGDEREGPVLRPLQHSASSSASSSSARSLENPTPPYTPRSR
RRSVDSPLALLPDSSALEEEVCEGQNWQDTVSPQLLAALTQREVDRQAVIYGTFGESGGK
AEPFEPETFLCSSPPELFTTEVSHLRTLKVLDQVFFQKMRPVLNAEELACIFPNLPQVYE
LHGSFCEAMKKRRESPVVQDIGDIMLARFEGQAGEEFQEQASQLCSQHSQAVELIKNKKR
KDPRFSQIIQECEASPLCRRLQLKDLLVSEMHRITKYPLLLDKIMKHTEAGAPDLPSLQR
AQACCRGILQTINEVVRETEHRQQLGQYQRRLDAAPQFKDRPSFASVLQNLDLTTKRMIH
EGPLTWKVSKDKQIEIQALLLSDCLVLLQRGPDDRLLLRHPSRWLGGGGPGGGDSKTSFS
PLVKLDSLLVRSVATGNVAEGYSSLFFKFCNKWRSNLRIWIPDHKALYVISTTERQIYEL
VAGTSSEKNTWKDLLEKTISAASGSSPQTNHTSMPIASSSVSPVSAGSHGYAEPSETKTA
SLSDAALQDVETLRRLILRDLEEDIEVAHHKLLKTLSSSANQESEDQQRSPTTVSRTPSL
DRGSINSERETEILLPQARTRSVTSPFAFTQAERPAQQNPRSSPPDSDAAAAATSLVQAR
LMAQRCSQTQPLLPSEGRGGFIIYLLLPVPDSAVSERWRRLCARGGDVGTEARKVRRSGK
AALG
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacgtcgactctggacaggctcagcagtctgaccgtcggggat
tcagagcgccggtcttctggcgcccagcagagggacccgtcggcggagctcccagcagag
ggcgccggtcccggtctcatccacagatgcgtggtcgtgcagaaggaccatctgggcttc
ggcttcaccgtctgcggggagcgggtcaagctggtccaaaatgtccgcgcgggcggcgcg
gcggtcaaggccggcgtccaggaaggggaccgaatcatcaaggtgaacggcgcgctggtg
tccaccatgtcccaccaggaagtggtcaagctcatcaaatctggacccttcgtagcgctg
acgctacaaggaccgcccccctccaccgcagccttacctttggaacccctccccaccgac
ttaacagccaatcagagagcgtcgctgagcggcgaggccccgccctctccccctccacct
gtgccccctggaatgggcagcatcccatcccaaagaatcaccggacccaaaccgctgcag
gacccagaagtacagaaacatgcgagtgagatcctcaggaaaatgctggagcaggaggag
gccgagctgcagaacttgctggaggagaggaagaagaacccctcgccatcgctggacgag
cgcatcgaacgcgccaggaggcgagcgcaccaggtcgcgatcaagatccagcaagaccag
gagtcgtcgcgctcggagcccgtccccggttacgtcatagcgggtcgtctgtctgtggat
tcgagcgagggagacgtggaggtgagcgttggtgtcaccgacagatacgtgtctgacacg
cacccactcacccctcctcctcctcctccctcccgctcctcctcctccttccccaggctt
gcgagagtccccactcctccccctcgtccttcaggaccccacagcaccgacgccagaact
cgaacgcgcccacggcagattcgagcccagatcatcggcccagaggaagagtacgacgat
gactacagctacaccttcgctgatgtgagtggggatcttctcagtcctgctcacctgggc
ttcccctccatccgtactcattcacgatttccttctcccctccccaagacggacggtccc
ttccaggacatcgaactgttgaagctgcgaccggcacacatgaccgtgttcatgagatac
atctttacccagcttctggaccccaaccctctggttgctgttttactgtcggtggaggct
tatctgggctccagctctaaagaggctcgtgcactcgcgcctcagatctgctcccatttc
ctggacccggatgctcccctgaaaatcaaagcgaaggaggagtttctgtccgatataggt
gcgaccgctgatggtttctcatcttttctcgatgaatgtcagtattattttcagaggtgt
gactacgcgtctgttttgccttcagatagtcgacttcacgctcaggaggacatcagagga
cccctgtcggagttgcagcagctggtcctgccggagatccaggaccaaatccaggactac
agaaataagcagatgatgggcctgggcaacctgttcgggcaggaagacttgcagccgctg
gacggagacccggccaaagagagacaggtggtggacaaacaggtcatcgcgctgtgggag
atactgtcaaagcatgaagaggacagaagctctcctctggcctgggccgtgctcctctac
ctgcgtcactccggcatcaagctgagagactccaaggtcttccctggactcaccacagag
aaggagaagtggctggcgttcctcaagacgaagaagctgagtggaatcaagaaagaaaag
gatggagaggacaaaaagagaaacccaatcctgaagtacatcgccaaaccccgaaccaca
tcccagtccacattccatgttccgttgtcaccctctgaagtccgttccggcaatgtgagg
aacatcattcagcagtttgagaatcacactgaagcgggagaggagggaggcgatgctgct
gacgcccagagactctcctccagcagcctgggagaggacagcatggacagccccacggtc
tccgtacgtctggcgcgtagcgagtctctgaaggcgcagggagagggccggcggcggggc
gccgcttcagggacggagtcggtccctcgctcccgcagcgacgtggacatggaagactgc
ggggacgagagggaggggcccgtcctcaggccgctgcagcacagcgcctcgtcctcggcg
tccagcagctccgcacggtctctagagaaccctacacccccatacacccctcgctctaga
cgcaggagcgtagactcgcctctggcgctgctgcctgactcttcggcgctggaggaggag
gtgtgcgaaggtcagaactggcaggacaccgtctcccctcagcttctggctgcgctcact
cagagggaggtggaccggcaggcggtcatatacggtacgtttggggaatcaggcgggaag
gcggaacccttcgaacctgagaccttcctctgctcgtccccaccagagctcttcaccacc
gaggtctcccacctgcggaccctgaaggtcctggatcaggtgtttttccagaagatgagg
cccgtcctcaacgccgaagagctggcctgcattttccccaacctgccgcaggtctacgag
ctccacggaagtttttgtgaggccatgaagaaacgcagagaatctccagttgttcaagac
atcggggacatcatgctggcgaggtttgaaggccaagctggtgaggagttccaggaacaa
gcgtcgcagctctgcagccagcactctcaggcggtggagctgatcaagaacaaaaaacgc
aaagatccccgattttcacagatcatccaggagtgtgaggccagtcctctctgccggagg
ctgcagctgaaggacctgctggtgtcagagatgcacaggatcaccaagtacccgctgctg
ctggacaaaatcatgaagcacacagaggccggagcgccggacctcccctcgctgcagcgc
gcccaggcctgctgcagagggatcctgcagaccatcaacgaagtcgtccgggagacggag
caccggcagcagctgggccagtaccagcgccggctggacgccgcccctcagttcaaggat
cgtccatcttttgcttctgtcttgcagaatctggacttgaccacgaagaggatgattcac
gaaggtcctctgacgtggaaagtcagtaaagacaagcagatagagattcaagcgctgctg
ctgtctgactgcctggtcctccttcagaggggccctgatgaccgcctgctgctcaggcac
ccctcccgctggctgggcggaggcggacccggcggcggagacagcaagacctccttcagc
cccctggtgaagctggactccctgctggtccgctcggtcgctacaggtaacgtcgcggag
ggctactcctctcttttttttaaattttgtaataaatggcgctccaacctgaggatttgg
attccagaccacaaagccctgtacgtgatcagcaccacggagaggcagatctacgagctg
gtagccgggacgtcgtcggagaagaacacctggaaggatctgctggaaaagaccatctca
gcagccagcggctcgtccccacagaccaaccacacgtccatgcccatcgcctcctccagt
gtgtccccggtgtcggccggcagtcacggctatgcagagccgtcggagacaaaaacagcc
agcctgtcggacgccgctttgcaggacgtggagactttgaggcggctcattctgcgggac
ctggaggaggacatcgaggtagcccaccacaagcttttgaaaaccctcagcagttccgcc
aaccaggagtcggaggatcaacagcgttccccgacaacggtctccaggacgccgtctctg
gaccgcggctccatcaacagtgagagagaaaccgagatcctgcttccgcaagcccgaact
cgctcggtaacgtctccgtttgcgttcacacaggcagagaggccggcccagcagaaccca
aggtccagtccaccggattctgacgcggcagcagcggcgacctcgctggtccaggcccga
ttaatggcacaaagatgtagtcagactcagccgctcctcccttccgagggccgcggcggc
ttcattatttatctcctgcttcctgttcctgactctgctgtttctgagcgatggcgccgc
ctctgtgcccgaggaggggacgtaggtaccgaagcacggaaagtccggagaagcggcaaa
gcagcgctgggatag
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integrated database retrieval system
