Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014759G001
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Entry
GSTEN00014759G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
GSTEN00014759G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00014759G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
GSTEN00014759G001
Protein recycling
Other Rab GTPase associated proteins
GSTEN00014759G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
FANCI_S1
CID_GANP
EST1
Rep_N
Motif
Other DBs
NCBI-ProteinID:
CAF97407
UniProt:
Q4SPM5
LinkDB
All DBs
Position
16
AA seq
245 aa
AA seq
DB search
MATEELSECVQDFYHNLSERLQTQFKGSLEHVEIVMDEVEKYMMSRLYKEVFCPETTDDE
KKDLAIQKRIRELHWVTIEMLCVPVDEEIPEVSDSVVKAITDVIEMDSQHVPKEKLACIT
RCSKHIFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPGRLMTGED
GYYFTNLCCAVAFIEKLDAQSLNLTSEEFELYMSGQASRTGRSPAPACCSPGSAPSARST
NGWRC
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaggaactatcagagtgcgtgcaggacttttaccacaacctttcggaacgc
cttcagacccagtttaaaggttcgttagaacatgtggagatcgttatggatgaagtagaa
aagtacatgatgagccgcctttacaaggaggtgttctgtcctgagaccacagacgacgag
aagaaagacctggctattcagaagagaatcagagagctccactgggtcaccattgagatg
ctgtgtgttcctgtggatgaggagatccctgaagtgtccgacagtgtcgtcaaagccatc
accgatgtgattgaaatggattcccagcacgtgcccaaggaaaagctggcgtgcatcact
cgctgcagcaagcacatcttcaacgccatcaaagtcagcaagaaggaggctgcgtcggcg
gacgacttcctccccaccctcatctacatcgtgctgaaagcaaaccctccccggctgcag
tccaacatccagtacatcactcgcttctgcaacccgggcaggctcatgaccggcgaggac
ggctactacttcaccaacctgtgctgtgcggtggccttcatcgagaagctggacgcccag
tccttgaacctgacttcggaggagtttgagctctacatgtcgggccaggcgtcgcgcact
ggccgcagtcccgcgccggcctgctgctcccccggcagcgcgccctcagccaggtccaca
aacggctggaggtgctga
DBGET
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