Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014761G001
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Entry
GSTEN00014761G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04560
syntaxin 1A
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
GSTEN00014761G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00014761G001
Membrane trafficking [BR:
tng04131
]
SNARE
Syntaxin (Qa)
Stx-PM
GSTEN00014761G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
NAI2_N
Prominin
GNVR
Talin_R4
HpsJ
DUF4658
Spectrin_Anc-1_2
DUF7792
FUSC
ALIX_LYPXL_bnd
SPACA6_N
Motif
Other DBs
NCBI-ProteinID:
CAF97409
LinkDB
All DBs
Position
16
AA seq
349 aa
AA seq
DB search
RSHFHLSFSVFAQVEEIRGFIESLAEKVEEVKRKHSAILASPNPDESKAASSSLVSGMVT
PLSAPNGNRGFQHHSLSETQTKAELEDLMADIKKLANKIRSKLKSIQQTIEQEEGQNRSS
ADLRIRKTQHSTLSRKFVEVMSEYNTTQSDYRERCKGRIQRQLEITGRNTTNEELESMLE
SDNPAIFTSGVGDAVGPPSGFISAAHIIMDNITEQAMNEIETRHNEIIKLENSIRELHDM
FMDMAMLVESQGGLVNNIERRVQEAQDYVEKAKESVPQCKKFKKTSKRGEMIDRIEYNVE
HSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGVVIASIVGGTL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
agatcacactttcacctctcgttctctgtcttcgcacaggtggaggagattcggggcttt
atcgagtctctggcagaaaaagtggaggaagtgaagaggaagcacagcgccatcctcgcc
tcgcccaaccctgatgagagtaaggccgcctcttcttctctggtctcggggatggtcaca
cccctcagtgctcccaacggcaaccgagggttccagcaccacagcctttccgagacgcaa
accaaggctgagcttgaggatttgatggccgacatcaagaagttggccaataaaatacgc
tccaagctgaagagtattcaacaaaccatcgaacaagaggagggacagaaccggtcatca
gccgacctgagaatacgcaagacgcagcactccacgctgtcgcgcaagttcgtggaggtg
atgtcggaatacaacaccactcagtcggactacagggagcgctgcaagggccgcatccag
aggcagctggaaatcactggaagaaacacgacgaacgaagagctggagagcatgctggag
agcgacaacccagccatcttcacctcgggggtaggtgacgcggtgggtccaccctccggt
ttcatctccgcggctcacatcatcatggataacatcaccgagcaggccatgaacgagatc
gaaacgcggcacaacgagatcatcaagctggaaaacagcatcagggagcttcacgacatg
ttcatggacatggccatgctggtggagagccagggcggcctggtaaacaacatagagcgg
agggtgcaggaggctcaggactatgtggagaaggcgaaggagagcgtccctcaatgcaaa
aagttcaaaaagaccagcaagcggggggagatgatagaccgtatagagtacaacgtggaa
cactcggtagactatgtggagagggcagtgtcagacactaagaaggccgttaaataccag
agtaaagccagaaggaagaagataatgatcataatatgctgcgtgattctgggtgtcgta
atcgcttccatcgtcggaggaactctg
DBGET
integrated database retrieval system
