Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014829G001
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Entry
GSTEN00014829G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00014829G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
GSTEN00014829G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_9
PAS_4
bHLH_HIF1A
SAGA-Tad1
Motif
Other DBs
NCBI-ProteinID:
CAF97456
UniProt:
Q4SPH6
LinkDB
All DBs
Position
16
AA seq
800 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCQLDKASVIRLTISYLHMRTFASQGDPPW
SPLMEGDSNCSKVRRSSHSLATDMFEQHLGAHLLQSLDGFVFVVSHEGRFLYISETVSIY
LGLSQSPSIRKRTLVLRTLVKKEVAQHEAPATSEFDSHTRPAVELTGSSVFDYIHPADHV
EMAERLGIRPHLRAEAGCHTAPESASSSASTSSLSGTPEPAPSSPHSITDEPPDRGFFIR
MKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPSTLNE
VRMESHMFVFRVNMDLQVIYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHEDL
LRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRNEMADTPLDL
LQLPESIRAERLRSSSSPASGSPQTRGSHSSVGKNDTDNKGRDKFASAAVQSEDRRKRQL
RSDPEGAPPETRRRLEEIRHTEESVSVSSDLASDSDGEEEEETEWEQGGSSDRMKPEDGG
AAGKPSRGADPPAAGERVSRVHNGRAVIQHLKSIVAPSALPGSPGIKTEHDALTSGGRWA
PHTQASQPQPSHAHTPSSSLNGDSPTTPIPDSSSTNEAPPKVLFTPPSPALSPAMSVSSP
LPRDERAVSGVVSRSGGGGAGSGPDFELLQRLAAGGAAGRVLFHPLALSPQGPQSLYAPS
TIRYAPPELPPSHHHGAGHGDGLQLRSDHHKGPPPAFFPHLQRLAGLPPFSGFSPSDSPF
SSSLPFCMNGLRGAAGSEED
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgccgttcgtcagcgaggggaagtgtgtgagtgtggagtgggatttccta
caaggacttctggccaagcctcctaccttgccctgccagttagacaaggcctcagtcatc
cggctgaccattagctacctgcacatgcgcacttttgccagccagggagacccaccctgg
agccccctcatggagggagacagcaactgcagcaaagtaagacgatcatctcattctctg
gcgactgacatgtttgagcagcaccttggggcacatctcctgcagtctctagatggcttt
gtgttcgtggtcagtcacgagggacgcttcctctacatctcagagacagtttcaatctac
ctgggcctctcacagtcaccgagcattagaaaacgtacacttgtactgaggactttagtg
aagaaggaggtggctcagcatgaggccccggctacctccgaatttgactctcacacgcgt
cctgcagtggagttgaccggcagcagcgtcttcgactacatccacccagcggatcacgta
gaaatggccgagcggctggggatcaggccgcacctgagggccgaggccggctgccacacg
gcccctgagagcgcctccagctcggcgtccacctcctccctgtctggtactcctgaacca
gctccttctagtcctcattccatcaccgatgagcctcctgatcgcggcttcttcatccgg
atgaagtccacgctgactaaaagaggcctccatgtgaagtcgtccggatacaaggtgatc
cacgtgacaggacggatccgctgccgccctgctctggtcccggggtccacgcgctccgtg
cgccgaccgatgggtttagttgcgctggcacacacgcttccgccatccacgcttaatgag
gtccgcatggagagccatatgtttgttttcagagtgaacatggacctgcaggtcatatat
tgtgagaacaggatctcagagtatatggatctgaccccagcggaggtcgtgggacataca
tgttaccacttcattcatgtagaagacctggaaaacctgcgtcagagccacgaggacttg
ctgaggaaaggtcaagtggtgaccggatactaccgttggctccagagacggggaggctac
ctgtggatccagtccacagccaccgtctccatcaaccacaaagcgccgcacgaacgcaac
gtcatttgggtgaactacgtgctgagtcgaaacgaaatggccgacactcctctggatctg
ctgcagctgccagagagcatcagggctgagaggctgcgaagtagctcgtcacccgccagt
ggctccccgcagaccagaggctcgcatagctcggtggggaagaatgacaccgacaataaa
ggcagagacaaattcgcctccgctgccgtccaatcggaggacaggaggaagcgccagctg
aggtcggatcctgagggcgccccgcctgaaacgcgccgccggctggaggagatccgccac
actgaggagagcgtgtcagtgtcctctgacctggccagcgacagtgacggggaggaggag
gaggaaacggagtgggagcaggggggcagcagcgaccggatgaaacctgaagacggcgga
gccgcaggtaagcccagcaggggggccgaccctccggctgcgggggagcgggtcagcagg
gtgcacaacggtcgggccgtcattcagcacctgaagagcatcgtggccccctctgccctg
ccggggagtcccggcatcaagactgagcacgatgccctcaccagcggggggcgctgggca
cctcacacgcaagcctcccaaccccagccctcgcacgcacacacaccctccagcagcctg
aacggcgacagccccaccacacccatccctgactcctcttccacgaacgaggccccgccg
aaagtcctgttcacgcccccctccccggccttgtctcccgccatgtccgtgtcctccccg
ctcccccgtgatgagcgggccgtgtcgggggtggtcagtcgcagcggcggcggcggggca
ggcagcgggcccgactttgaactgctccagagactagctgccggtggggcagcggggagg
gtcctcttccaccccctggccctcagcccccaaggccctcagagcctctacgcccccagc
accatccgctacgctccacctgagctgcccccctcccaccaccacggcgccggacacggc
gacggcctgcagctacgctcggaccaccacaaggggcccccgccggccttcttccctcac
ctgcagcggctggccggcctgccccccttcagcgggttctccccctccgacagccccttc
tcctccagcctgcccttctgtatgaacggcctgaggggggccgcaggctcggaggaggac
tga
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