Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014890G001
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Entry
GSTEN00014890G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04270
Vascular smooth muscle contraction
tng04625
C-type lectin receptor signaling pathway
tng04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
GSTEN00014890G001
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
GSTEN00014890G001
09153 Circulatory system
04270 Vascular smooth muscle contraction
GSTEN00014890G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00014890G001
Membrane trafficking [BR:
tng04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
GSTEN00014890G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
CAF97498
UniProt:
Q4SPD4
LinkDB
All DBs
Position
16
AA seq
1281 aa
AA seq
DB search
GLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSN
HIEVVKLIKSGSYVALTVLGRPPGLTQIPLSEAESEMLGVSISSPNSPATERPYSPQDRF
SAQPSWDENNSACNQKVDYSVKMLSREQQELQEPFHSIDADDGSIFETEFFPTSKGGDNN
TDLSLFSTPMSRGFGCGSPESLYPKESSFPSPKSTPRNSLNSCHSPDAEDATDLVAADIS
PQKCANDSLSPITVGSPSVTRVISQIIGAEDDYFDSDQEQSNGQCNSFNSIEQLKSRPAH
LAAFLHHVISQFDPAPVLCYLYADFYKQTNSKETRRVFMDLHNFFIDRGANLKVPVPDSI
SADLDRRRTELIPEEINRQLVQTLQDSLLPDIQKNLEDFRQKRSMGLTVAEGELSRLDQE
RIRDRVTLERERSYAENIISKIEDILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRS
LESKRVRINFLPKIKKSIKTEKEGEEKKKPRFPSILGPQRRPSRIEAAPVGKALDGRPRP
QKRQSQPTLGASEHMEAGRLRGSHSSEGPELIHGTSVNISSSNSAAVNLDSSRDADTSGS
LTSVPSRMSDGLQADLLEGLPYPPTHFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEAIG
AADVQSEDDQGTDSEHDPPYWQQLVGREVLAGLMPQEIKRQEVINELFYTERAHVRMLRV
LDHLFYQRLSKDAILPPADIKNIFPNLEEISQLHVSILEQMAAVRKRNESSVIDQIGDDL
LSWFSEGEEEKIKQAAGTFCSNQPFALEIIKTKQKKDSRFASFVQEAESNRLCRRLQLKD
IIPIEMQRLTKYPLLLDNIAKYTDNAAEKDKVKQAADCCRKILNHVNQAVKESENKQRLE
DYQRRLDLSSLKQTDNPMILELKNLDLTKRTMVHEGPLSWKMNKEKTIELYTLLLEDILV
LLQKQDERLILKCHSKNLASTADTKHIFSPIIKLNTVLVRSVATDNKSFFVLCTSENGPQ
IYELMAPTVSDQRTWQRLITQRADAMKVKPHSVIPLPQTDCNTFVEVKAEGEEEEGGFAD
SELPYRVTEDGKKRDLYEGVPCRADEALKTLAALKQVLVTQLMSQEATQQNKRSTGPRLL
RTTSLRTPVESCARVMVHNGSEKITSKLEEAAQDLGSRDKGFFDTPEDYAGYLVLEGYSG
PGESSTDDDILASAAGKLLRSTRGCAVDSSSNSRFSLMSQAGSLSSFSRQVLSHLRSLQA
DLSYLKAYETPRGIIVTPNGQ
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
ggtctggtccagcgatgtgtaataatccagaaagatgaaaatggctttgggctcactgtc
agcggggacaacccagtgtttgtgcagcttgtcaaagaagatggggctgctatgcgagca
ggtgttcagacaggagataggattatcaaggttaacgggaccctggttacacattctaat
cacatcgaggtggtgaagctcatcaaatctggctcctatgtggccctcacagttttgggc
cgtcctccagggctcacccagatccctctgtctgaggcagagtcagaaatgttgggtgtt
agcatttcctctccaaactccccagcaacagaacgcccatacagtcctcaggatcgcttc
tcagctcagccatcatgggatgagaacaacagtgcctgcaaccagaaggttgactactca
gtaaaaatgctctccagagagcagcaggaactgcaggaaccttttcacagtattgatgcc
gacgatggtagcatatttgagactgagttctttcccacctccaaaggaggagacaacaac
acagatttgtccctgttcagcactcctatgtctcgtggattcggatgtggatctccagag
agcctctatcctaaagagtcatccttccccagcccaaagagcacacccagaaacagcctc
aactcctgccactcgccagatgcagaagacgctactgacctggtagctgccgacatttct
cctcaaaaatgtgccaatgactctctgtccccaatcacagtcggcagtccctctgtcacc
cgcgtcatttcacagatcattggagctgaggatgattattttgattcagaccaggagcag
tcaaatggccagtgcaacagctttaacagcattgagcagctcaagtctcgccctgcccac
ctcgcagccttcctccaccatgtcatctcccagttcgaccctgctccagtgctgtgctac
ctctatgctgatttctacaagcagaccaactccaaagagaccagacgggtgttcatggac
cttcacaacttttttattgatcggggagctaatttaaaagttcctgttccagactccatc
tctgctgatcttgaccgtcgacgaacagaactgattcctgaggaaataaacagacagctt
gttcaaacgctgcaagactctctgctccctgatatccagaaaaacctcgaggacttcagg
cagaaacgcagtatgggcctgacagtggccgagggggagctgtccagactggaccaggag
aggattagagaccgcgtcaccctggagcgagaacgctcatacgctgaaaacattatcagc
aagatagaggatatcctgttaactacacagacaacagaggaagagaaatgcactacaatg
cagtatgtcatctatacatacatgaagcaccttggtgtgagggtcaaagaacctcgcagt
ctggagtccaaacgggtccggatcaactttcttcccaagataaagaaaagcattaagaca
gaaaaagaaggagaggaaaagaagaagcccagatttcccagtattctgggacctcagcgt
cgaccaagccgtattgaagctgcaccagtgggcaaagctttggatggccgtccccggcca
cagaaacggcagtctcagcccacgcttggtgcaagcgagcacatggaagctggtcgtctg
cgaggcagccattcaagcgaaggccctgagctcattcacgggacgtctgtcaacatttca
tcctccaacagtgccgccgtaaacttggacagcagccgagacgctgatacgagtgggagt
ctgacctcagtcccctccaggatgagtgatggccttcaggctgacctgctggaaggcttg
ccctaccctcccacacactttgacctttacagcttggaccaactgcaagaggacgacaga
gaaagcgacagagctcacgagggaacaccaaaagcaattagaagattggaggcaataggc
gccgctgatgtccagagcgaggatgaccaagggactgactccgagcacgaccccccctac
tggcagcagctggtgggccgggaggtcctcgcaggtctcatgcctcaggaaatcaagaga
caagaagtcatcaatgaactgttttacactgaacgagcgcacgttcgaatgctgagagtt
ttggaccaccttttctaccagagactctccaaagacgccatcctacctcctgcggacatt
aagaacatctttcccaatttggaagagatttcacaactgcatgtttcaatactagagcaa
atggcagctgttcggaagagaaacgagtcttcagtaattgatcagataggagatgacttg
ctctcctggtttagcgagggagaggaggagaagatcaagcaagcagcgggtaccttctgc
agtaaccagcctttcgctctggagatcattaagaccaagcagaagaaagattcccgcttt
gcgtcattcgttcaggaggcagagagtaaccgactgtgtcgtcgacttcagcttaaagac
atcatccccatagagatgcagcggctcaccaagtaccccctgctgctggacaacattgct
aaatatacagacaatgcagccgagaaggataaagtgaagcaggcagcagattgctgtaga
aagattctcaatcacgtcaaccaggctgtgaaggaatcggagaacaagcagcggttagag
gactatcagagaagattggatctgtcttccctaaagcagacggacaacccaatgatcttg
gagttaaagaacttggatctaactaagagaacaatggtgcatgaaggtccactgtcctgg
aaaatgaacaaagagaagactattgaactctacactctgctcctggaggacattctggtc
ctgctgcagaaacaggacgaacgcctcatcctcaaatgtcacagcaaaaatctggcaagc
accgcagacaccaaacacatcttcagccccatcatcaaactcaacactgtgctggttcgc
tcggtggccacagacaacaagtccttcttcgtcctttgcacgtcagaaaacggaccccag
atctacgagctaatggcaccaacggtctcggatcagaggacgtggcagcgtctcatcacc
cagagagcagacgccatgaaagtcaaacctcacagcgtcatcccattaccccagaccgat
tgtaatacctttgtggaagtgaaggcggagggagaagaagaggagggaggatttgcggac
tcggagcttccttaccgagtgaccgaagacggcaaaaaacgagacttgtacgaaggggtc
ccctgcagagccgatgaggccctgaaaacgttggcagcattgaagcaggtgctggtgacc
cagctgatgtcccaggaggccacgcagcagaacaaacgctccacggggccccgtctgctc
aggaccacctctctgaggacccccgtggagagctgcgcccgcgtaatggtccacaacggc
tcggagaagatcacctccaagctagaggaagcggcccaggatctgggctccagagacaag
ggcttcttcgacacccctgaggactacgcgggatacctagtgctggagggttacagtggc
cccggagagagcagcaccgatgacgacatcctggcgtcggcagcagggaagctcctgcgc
tccacgcgaggctgcgccgtcgactcgagcagcaattccaggttctccttaatgtcgcag
gcgggcagcctgtcctctttcagcagacaggttttgtctcacctccggagccttcaggcc
gacctcagctacctgaaggcttatgaaacccctcgtggaataattgttacgccgaacggt
cagtaa
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