KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015108G001
Entry
GSTEN00015108G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K15361  WD repeat-containing protein 48
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    GSTEN00015108G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00015108G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     GSTEN00015108G001
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st DUF3337 WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 WDR54 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WD40_like RAWUL Beta-prop_VPS8 Tfb2_C
Other DBs
NCBI-ProteinID: CAF97674
UniProt: Q4SNV8
LinkDB
Position
15
AA seq 707 aa
TCKMATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIW
SVYQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK
DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN
QMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLW
SLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPV
LKMELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVI
KGGASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVP
NWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRT
RINPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGET
ESMLLNETVPQWVIDITVDVSTSPGGNCVSGLRVRKAVNLFPVWFQKNMPKFNKIPFYLQ
PHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSANDKPGEQEKEED
MAMLAEEKIELMCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2124 nt   +upstreamnt  +downstreamnt
acatgcaagatggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtg
tcctatgtcattagagatgaggtggaaaaatacaatcggaatggggtgaatgcgctgcag
ctggacccggctcttaatcggctcttcactgccggaagagattcaatcatccggatatgg
agcgtctaccagcacaaacaggacccatatattgcctcaatggagcaccataccgactgg
gtcaatgacatagttctctgctgcaatggcaaaacattaatatccgcctcgtcggataca
acagtcaaagtatggaacgctcataaagggttctgtatgtcgacgttacggacacataaa
gactacgtgaaggctctagcgtacgctaaagacaaggagctcgtggcgtcagcaggtctg
gaccggcagatttttctttgggatgtgaacacacttacagcactcactgcttccaacaac
actgtcaccacctcgtcgctcagtgggaacaaggactccatctacagcctggccatgaac
cagatgggcaccgtgatcgtgtccggatcgacagaaaaggtgctgagagtgtgggatccc
cgaacatgtgcgaaactcatgaagctaaagggtcacacggacaacgtgaagtcgttgctg
ctcaatcgagacggcacccagtgcctgtcgggcagctcggacgggaccatccgcctgtgg
tcgctcgggcagcaacggtgtatcgccacctaccgggttcacgacgaaggagtgtgggcg
ctgcaggtcaacgaggccttcacgcacgtttactctggaggcagagacaaaaagatctac
tgcaccgacctgcgaaaccccgacatccgcgtgctcatctgtgaggagaaggccccggtg
ctgaaaatggaactggacagatctgctgacccacctccagcaatctgggtctccaccacc
aagtcatccgtgaataaatggtctctcaagggaatgcacaacttcagatcatcgggggag
tatgacaacgactgcaccacccctctgacgccactgtgcacgcagccagaacaagtcatc
aagggcggcgccagtatcatccagtgccacattctgaacgacaagagacacattctcacc
aaagacaccaacaacaacgtggccttttgggacgttttaaaggcttgcaagggcgaagac
ctggggaaggtggagtttgacgaggagatcaaaaagcggttcaagatggtttatgtgcca
aactggttctctgtcgacctgaaaactgggatgctcaccatcacgttagatgagagcgac
tgcttcgctgcctgggtgtccgcgaaggatgccgggttttcaagttccgacggatccgac
ccaaagctgaacctgggcggcctgctgcttcaagctctcctggaattctggccccgaact
cgcatcaaccccatggacgaggaagagaacgaagtcaaccacgtgaacggagagcaggag
aaccgagtccagaagggaaacggatacttccaagtgccgccgcacaccccggtcatcttt
ggagaagcaggaggcagaactctgtttaggctattatgtagagattcgggcggagagacc
gagtccatgctgctgaacgagactgttccacagtgggtcatcgatattactgtagatgtg
agtacctcacctggtggaaactgcgtttcaggtctgcgtgtacgtaaagcggttaacctt
tttcccgtttggtttcagaaaaatatgcccaagttcaacaaaatcccgttctacctccag
ccgcattcttcgtccggcgcgaaaacactgaaaaaggaccgtctgtccgccagcgacatg
ctgcaggtgaggaaggtgatggagcacgtttatgagaagatcatcaacctggacaacgag
tctcagaccaccagctcctccgccaacgacaagcctggggagcaggagaaggaggaggac
atggccatgctggccgaggaaaagatcgaactcatgtgtcaggaccaggttctagatccc
aatatggacctgcgaacagttaaacattttatctggaaaagcggaggggacttgacgctt
cactataggcagaagtccacgtga

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