Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015171G001
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Entry
GSTEN00015171G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00015171G001
Membrane trafficking [BR:
tng04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
GSTEN00015171G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
7tm_1
LRR_6
Motif
Other DBs
NCBI-ProteinID:
CAF97724
UniProt:
Q4SNQ8
LinkDB
All DBs
Position
15
AA seq
1412 aa
AA seq
DB search
RKARDSLPTFRQFFSSAFSLSHVSLASMKVPPDWLRALFLGLSNNPHITDLHLDISSCEL
RSAGAGVIQELFPRVSCVGTLDVSDNGEHTCAEQLAAFRLTALHTSHRGRLTAETTSCLD
ADLLAVIPAFSRHPSLKHLMLGKNFNIKGRALDEILQKLVHLVQEEDCALQSLSLADSRL
RQRGSVLVNALGSNTCLRKVDLSGNLLEDPGAKMLSKALQINTTLRSVTWDRNNTTPTGF
QDVARALEHNFTLQYMPLPLSDVTQAYRSAPEKTEQALTKIQRALLRNNQTQRFSQKQAL
RLHQGLVTSTAEQVMERLCVRLQQQVCTLKGCEEEEEVQTARQILKEARDSRALYPSLCE
LAHVLSVDGPVKQRLDTLAGELAKAADKELQVVVDSMVSLCRELCPMSCSAAERLNPPFS
SISEQVSIPRASIRNALMERAAEDINRALEEVKLSVVSYLTNSIVDQILQELYTSHKTLV
LMRQVSQAKRWDDLGPGRHTLRQSRVIESLDFPDEEFSVNLGIDTMAIKKRSSRTRRIRP
VSSRLSEWPSAGSSSQRNRSRSGQERSCHDNHSVVAGLSEEASPSPTPPAPPHPAPLTHS
ASWECLSTLPTNGSPLRHVTHVRPRPPRRHPAGHLPSDAQYTENGGVSMLEDGLPDFYSK
RVLPDRENTACVDQSVSAVIAPSGPVTQEKEETQRSVHFLRLQKEPNALENVYSMIQHPK
DAARPDSAVPGANGSVASPRSPQDAPGQGVRAASPPCLIQRQSTDLVSMVYSCIGAEIED
SDGSSTSDTRATAETERLTTVSEAPADTRSNGHVVPSRQQTDRQTCRQERIVPLAGTQAE
VEEDAHSGGGTRPEPPPQSTKPSLAIMRQRHLQDSLEEAGRLREEEDQSEKRPEDRPRVR
GQEGQRPLIPNTVKAPWFGPKGPDFGWRQKKSMSLFSPQPSFDKTSPEKEATSPSSLPGE
ESTGEQRSFPPAQPTIQEEERKSPPAPAKAGIEAGNPPSQDEEGQNGFSASSHPARKPNS
VDTGMDPGIPSDLDRSSDRRVPVSKPCFPQYRNRSLDCPAGTRFLIHHTCQSLTRTMPAI
VNLLFNAVSTNTTITFTVVLPLVSMVSLVVGGWSASFQNWQLGGGTCVLLGFMTSVTVGV
EIFSLAALSVLRYRIVAPQMRPPANLTQVFGMVIVIWLVSVTMALPKVTYINFDVGCTWS
VGRNEWLFFLVPAFLVYYVAPLLCIAINCGLIISHLRRCRATLAADRRNKKATALLIAST
VVFAISWLPYYALEFVNVTSHQFSSAAFPLSRFARNLSSTLSPLYLTPTSLGPTGQADAG
VSLWWEVASLIAILLVCLAPCWNPPLYFLLSRPAVRQLRAMLPSFFHKSLARKPVQGWRI
APAPPSRLPHVQKHSLTHQTHTQTDSVKLAQT
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
aggaaagccagagattctctcccaacgttccgccagttcttcagctcagcgttcagcctg
agccacgttagcttagcctccatgaaagtccctcctgattggctcagggctctgtttctg
ggtctgtccaacaaccctcatatcactgatttacacctggacatcagcagctgtgagctg
aggtcggcgggtgccggcgtgatacaggagctgtttcctcgggtctcgtgcgtggggacc
ttagacgtctccgataatggtgagcacacctgcgccgagcagctggctgctttcagatta
accgctcttcacacttcccatcgaggtcgtctcactgcggagacgacgtcttgcttggat
gctgatttgctggccgtcatcccagcgttctcccggcacccctccctcaaacacctgatg
ttgggaaagaacttcaacatcaagggcagggcgctggatgaaatcctgcagaaactggtt
catttggtgcaggaggaagattgtgccctgcagtccctctctctggctgactcgcgcctt
cgccagcggggctcggttctggtcaacgctttgggttccaacacctgcctccgaaaggtg
gacctgagcgggaacctgttggaggatcccggagccaagatgctcagcaaggccctccag
atcaacacaacactgaggagtgtgacgtgggatcgtaacaacaccactccgacgggattc
caagatgtggcgagagccctggaacacaacttcacccttcagtacatgcccctccccctc
agtgatgtcactcaagcgtaccgcagtgccccggagaagaccgagcaggctctgaccaag
atccaacgtgctctgcttaggaacaaccagactcagcgtttctcccagaaacaggctctc
cggctgcaccaaggccttgtcaccagcacggctgagcaggtgatggagcgtctgtgtgtg
cggttgcagcagcaggtttgcactctgaaaggctgcgaggaagaggaggaggtccagaca
gccagacagatcctcaaagaagctcgagactccagagctctgtatccgtccctgtgcgag
ctggcccacgtgctgtcggtggacggacccgtcaaacagcgactggacaccttggccgga
gaactggccaaggctgctgacaaagagctgcaggtggtggtggactcgatggtgtctctc
tgccgcgagctgtgtccgatgtcctgctcggcagccgagaggctcaacccgcccttttca
tccatctccgagcaggtgtccatccctcgcgccagcatccgtaatgccctcatggagagg
gcagcagaggacattaacagagctctggaggaggtgaagctgtctgtggtctcctatctg
accaactccatcgtggaccagattctccaggagctctacacctctcataaaacactggta
ctgatgcggcaggtgtcccaggccaagcgttgggacgaccttgggccaggcagacacacg
ctcagacagtccagagtgatcgagtctctggatttcccagatgaggagtttagcgtcaac
ctgggaatagacaccatggccattaagaagcggagctccagaaccaggagaatccgtcca
gtctcctccaggctgagcgagtggccttcagcaggtagctcctcccagaggaacaggagc
aggagcggccaggagcgcagctgccatgacaatcattctgttgttgcaggtttgagtgag
gaggccagtccctcccccacccctcctgcgccgccacacccggcccctcttacccactca
gcatcgtgggagtgtttgtccaccctgcccaccaacggctcccccttacgccacgtgact
cacgtcaggccccggccaccccggaggcacccagcgggacacctcccctcagacgctcaa
tacacggagaacggaggagtcagtatgctggaagatggactgccggatttttacagcaag
agggttttaccagacagagagaatacagcttgtgtggatcaatctgtgtcagctgtcatc
gctccatcaggcccagtcactcaggagaaagaagagacgcagcgttctgtccattttctc
cggcttcagaaggaacccaacgctttggagaacgtctactcaatgattcagcaccccaaa
gatgctgccagaccggacagcgcagtccccggggcgaatggttccgtggcttcacctcgg
tccccgcaggatgcccctgggcagggggtgcgagctgccagccccccctgcctcatccaa
agacagtctacagacctggtcagcatggtctacagctgcatcggagcggaaatcgaagac
tctgacgggagcagcaccagcgacaccagagcgacggctgaaaccgaaaggttgaccacc
gtctccgaagcccccgcagacactcgcagcaacggccacgtggttccctccaggcagcag
acggacagacaaacgtgcaggcaggagaggatcgtacccctggctgggacacaggcggag
gtggaggaggacgcacacagcggcggtgggacgaggccggagccaccgccgcagagcacc
aaacccagtctggccatcatgaggcagagacacctgcaggacagtttggaggaggcagga
aggctgagagaagaagaggaccaaagtgagaagagacctgaggacagaccgagagtacga
gggcaggagggacagcgtcctctcatacccaatacggtaaaagcaccttggttcggtcct
aaagggccagattttggatggcggcaaaaaaaatccatgtccctgttctctcctcagccc
agtttcgacaagacctctccagagaaagaagccacctctcccagcagtttaccaggggaa
gaatccaccggagagcaaaggagttttccccccgctcagccgaccattcaagaggaggag
aggaagagcccgccagcgccggccaaagcggggatagaggcagggaatccccccagccaa
gatgaggaaggccaaaatggattttcagcctcgtcacatcctgccaggaagcccaactct
gttgacacaggcatggacccgggcatcccttctgatctggacaggtcttcagatcgcaga
gtgcccgtgagcaaaccctgtttcccccagtacagaaacagatctctggactgccctgct
gggaccagattcttgatccatcacacttgccagagcctcactcgcaccatgccagccatc
gtcaacctccttttcaacgccgtctccacaaacaccaccatcacctttaccgtggtgttg
cctttggtcagcatggtctcccttgtggttgggggttggagtgctagtttccagaactgg
cagcttggcggcgggacatgtgtcctgctggggttcatgacctcggtgacagtgggagtg
gaaatcttcagcctggctgctctgtcggtgctgaggtaccgcattgttgcacctcaaatg
agaccacccgctaatctgacgcaagtgtttggcatggtcatcgtcatttggctggtgtca
gtaaccatggccctacccaaagtcacctacataaactttgatgttgggtgtacgtggtcg
gtgggccggaacgagtggctgttcttcctggttcctgctttcctggtttactacgtggcc
cctttgctctgcatcgccatcaactgtggcctcatcatctcgcacctcaggcgctgcagg
gccaccctggcggctgaccgccgcaacaagaaagccaccgctctgctcatcgcctccacc
gttgtgttcgctatcagctggttaccgtattacgcactcgagtttgtcaatgtcacatcc
catcagtttagctcggcagcgtttcctctcagcagatttgcacgtaacttgtcctctacg
ttgtcgccgctgtatttgaccccaacgtctcttggaccgactggacaagcggatgctggc
gtttccttgtggtgggaggtggcctccctgatagcaattttactggtgtgtctggctccc
tgctggaatccaccgctgtacttcctactgtcacgcccagctgtgcgccagctccgagct
atgctgccttctttcttccataaatccttagcgagaaagcccgtgcagggctggcgtatt
gcccccgctcctccttcacgcctgccacacgttcagaaacactccctcactcaccaaacc
cacacacagaccgactcggtaaagttggcacaaacatag
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