Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015362G001
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Entry
GSTEN00015362G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00015362G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00015362G001
Spliceosome [BR:
tng03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSTEN00015362G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
CAF1
Motif
Other DBs
NCBI-ProteinID:
CAF97865
UniProt:
Q4SNB7
LinkDB
All DBs
Position
8
AA seq
747 aa
AA seq
DB search
MSLNKREVEELKPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEAVEESRNSRGNKDVERIRKRDLKDAFGEPTETVVMREVREQTDGVTAKKKRF
PHFEEVDEPEVIPGPPSESPGMLTKLQIKQMMEAATKQIEERKKQLTFTSPVTSASVIQQ
IGLFHSLIIYHRFQAVFKQHFMNDAIEKARKAAELQARIQSQLSMKPGILGALGNTGPHN
LVALANLHAMGIAPPKVEAKEITKPTPLILDDKGRTVDATGKEIELTHRMPTLKGIFPPL
LPSFGGRKGVETPVFIRVSVANIRAVKREQFRQQLKEKPGEDLEALSYFDNRVSLTQAQR
PRKGFKFHEQGRFEKIAQRIRTKAQLERLQNEISQAAKKTGIHASTKLALIAPKKEIEDG
EIPNVEWWDSFILPSNIILSETNFDQVELFGVTNLVEHPAQIRPPVDTNKQVTLGVYLTK
KEQKKLRRQTRREAQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRA
QMAKRQKAHEEANAARKLTAEQRKEKKVKKLKEDLSDGVHIAVYRIRNLQNPAKKFKVEA
NANQLYLTGTVVLHKDVNLVVVEGGEMNSCNRLVLFALVSHRFSICFLRSQFLGPKSQKK
FKRLMLHRIEWVEHSSKRDDPDADDDTKRNNKCWLVWEGTAKERSFGDMKFKQCPTESMA
REHFKKHGTEHYWDLALSLSVLETSDD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaataagcgggaggtggaggagttaaaaccatgggtggaacgcactgtgaag
aaggtgctgggattctcagagccaacggtggtcacggcagctctacactgtgttggcaaa
ggactggacaaacggaagactatagaccagttgcgtcctttcctcgatgactctgctgga
gggtttgtagagcgtctttttgaagctgtggaggaaagccgcaattcccgtggcaacaag
gatgtagaaaggatccgtaagagggaccttaaggatgcttttggtgaaccaaccgaaact
gtagttatgagagaagttcgtgagcagacagatggggtaactgctaaaaagaaaaggttc
cctcatttcgaggaggtagatgagcccgaggtcattcctgggcccccatctgagagcccc
ggcatgctcaccaaacttcagattaaacaaatgatggaggctgccacaaaacagatagaa
gaaaggaagaaacaactgaccttcacttctccagtcacttctgcatcagtaatacaacaa
attggattatttcactcactaataatatatcaccgctttcaggctgtgtttaagcaacac
ttcatgaacgacgccatcgagaaggcccgcaaggctgccgagctgcaggcccgcatacag
tcccagttatccatgaaacccggtatcctgggagctttggggaacaccggacctcacaac
ctggtggcactggctaatctacacgctatgggaatcgctcccccgaaagtggaagccaaa
gagataactaagcccacacctcttattctggatgacaaggggagaacggtagatgccact
ggcaaggaaattgagctgacgcatcgcatgcccacactgaaaggtattttccccccgctt
ctaccctcctttggtggaaggaaaggcgttgaaacacctgtgttcatccgtgtctccgta
gccaacattcgcgccgtgaaaagagaacagttccgtcagcagctgaaggagaaaccgggg
gaggacctggaagctctgtcctacttcgacaaccgcgtgtctctcactcaagctcaacgt
ccacgaaagggcttcaaattccacgagcagggccgcttcgagaagatcgcccagaggatc
agaaccaaggctcagttggaacggctacagaatgagatttcccaggcggcaaagaagacc
ggaatccacgcatcaaccaagctggccctgatcgctcccaagaaggaaatcgaggacggc
gaaattcccaacgtggagtggtgggactccttcatcctaccatcaaacattatcctatca
gaaacaaactttgatcaggtggagttatttggcgtgaccaacctggtggagcaccctgca
caaattagacctcctgttgacacaaataagcaagtaacgctgggagtttacctgacgaag
aaagaacagaagaagctgagaagacaaacgcgaagagaggcacaaaaagaagtacaggag
aaggtccgcttggggctaatgcctccaccagaacctaaagttcgtatctccaatctgatg
agagtactgggaacggaggcggttcaggaccccacaaaggtggaggctcacgtccgggct
cagatggccaagagacagaaggctcacgaagaagccaacgcagcccgcaagctcacagcg
gagcaacggaaggaaaagaaggtgaagaagttaaaggaggacctcagcgacggggttcac
atcgccgtgtataggatccgtaacctgcagaatcccgctaagaagtttaaagtggaagcc
aatgccaaccagctgtacctgacaggcacggtggtgttgcacaaagatgtcaacctagtc
gtggtagaaggaggtgagatgaattcatgcaatcggttggttttatttgctctcgtttct
caccggtttagtatttgtttcctccgctcccaatttttaggccccaaatctcagaaaaag
ttcaagaggttgatgctgcaccgaattgagtgggtggaacacagcagtaaaagagacgac
ccggatgctgatgatgacacaaagaggaacaacaaatgctggttggtctgggaggggaca
gctaaagaacgtagttttggggatatgaaattcaaacagtgcccgacggagagcatggcc
cgagaacacttcaagaaacacggcacagaacactactgggacctggctcttagcctgagc
gtgctggaaacctcagacgac
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