Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015397G001
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Entry
GSTEN00015397G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00015397G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00015397G001
Spliceosome [BR:
tng03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSTEN00015397G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-ProteinID:
CAF97896
UniProt:
Q4SN86
LinkDB
All DBs
Position
8
AA seq
527 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPEGEDIDSDGEATQGRTDRLEDIPEEMEVDYSKAESV
TSIAKLRNSKQFSDIMDKISDYIGKQRKNSDISGPVEADPEYRLIVAANNLTVEIDNELN
IIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVS
VTASTTQGSLLSEEELNQLVEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTA
AKLMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQTLPPDLR
RKAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNDATKARISKSLQQRDSALWCFTRQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTP
LQMISSDHAHVLQGLEIVNPQAAEKKVAEANQKYFSNMAEFLKVKKE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcggacgagctcctggccgacctggaggaggctggtgatgaaggagaggat
ggcttgtatccagagggggaggacattgacagtgatggcgaggcaacccagggacggaca
gacaggctggaggacatcccagaggagatggaggtggactacagcaaggcggagagtgta
acctccatcgctaagctccgtaatagcaaacagttttcagacattatggacaaaatttcg
gactatatcgggaagcaacgtaaaaactcagatatttctggtccggtcgaggccgaccca
gaatacagactcatcgtagcggccaataatctgacggtggagatcgacaatgagctcaat
attattcataaatttaccagagacaaatactccaaaaggttcccagagctcgaatcgctg
gtcccggattctctcgattacatccggacagtcaaggaattgggaaataatctggagaaa
tgcaagaacaacgagacgctgcagcagatcctcaccaatgccactattatggtggtcagt
gtcacagcctcaaccacacaagggtcccttctgagtgaggaggagctgaaccagcttgtg
gaagcgtgcgacatggctctggagctgaaccagtccaaacacaggatctatgaatacgtc
gagtccagaatgtccttcatcgccccaaacctctccatcattgtcggggcgtcaacagcc
gccaagttaatgggtatcgccggaggcctgaccaacctgtccaagatgccggcgtgtaac
ctgatgctgctgggagctcagagaagaaccctgtctggcttcagcagcacctccctgctg
ccccacacgggcttcatctaccactgcgacgtggtgcagacgctgcccccggacctcagg
cggaaggcggcgcgactggtggcggcaaagtgtacgctggccagccgggtggacagtttc
cacgagagttcagacggcaaggttggttacgacctaaaggaggaaattgagaggaagttc
gataagtggcaggagccccctccagtgaaacaggtcaagcctctgcccgccccgctggat
ggacagaggaagaagagaggtggacggaggtaccgaaagatgaaggagcgtctggggctg
acggagatcaggaaacatgccaacaggatgacctttgcagagatcgaagacgatgcctac
caggaggacctgggcttcagcctgggtcagctggggaagagcggcagcgggcgcgtccgg
caggctcaggtcaatgacgccaccaaggccaggatctccaaatcgctgcagcagcgtgac
tcggctttgtggtgtttcacgcgtcagcggacgctgcagaagcagagcatgacgtacgga
ggcaagtccacggtccgagaccgctcctccggaaccagctccagcgtggccttcactcct
ctacagatgatctccagtgatcatgctcatgttctgcagggactggagatcgtgaatcca
caggctgcagagaagaaggtggctgaagccaaccagaagtacttttccaacatggccgag
ttcctcaaagtcaagaaggag
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