KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015424G001
Entry
GSTEN00015424G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00015424G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00015424G001
Spliceosome [BR:tng03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GSTEN00015424G001
 Complex B
    GSTEN00015424G001
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-ProteinID: CAF97922
UniProt: Q4SN60
LinkDB
Position
8
AA seq 458 aa
MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVT
PTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQ
DKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTV
VPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLN
DQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLNSSVTQMGGVPTEV
LCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFM
SVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtcggattacgacgaatttgagagacaactgtcagaaaataaacaagcggaaagggac
aaagagaaccgccatcaccgccgttcctcctctcgcagccgcagtagagagaggaagagg
aggagcagagacagagacagacgcagcagagatcggcgtggggacagcaaggagcgcaga
cacagacgcagtcgctctcctcaccgtgagaagaagaagaaggtgaagaagtactgggat
gtccccccgcctggctttgaacacatcactccgatgcagtacaaagccatgcaagctgca
ggccagatcccggccaccgccctccttcccaccatgactccagacggcctggcggtgacg
cccacccccgtacccgtggtggggagccagatgacccgccaggcccgccgactctatgtg
ggcaacatcccctttggtatcacagaggagtctatgatggacttcttcaatgcccagatg
cgtttgggtggtctcactcaagcacctgggaaccctgttcttgcagtccagatcaaccaa
gacaagaactttgccttccttgagtttcgttcagtggatgaaacaacacaggcaatggca
tttgacggcatcatctttcaaggccagagcctgaagatccgccgtccccacgattaccag
cccctgcctggcatgagcgagaatcccagtgtctatgtgcctggggttgtgtccacagtg
gtgcccgactcggctcacaagctcttcatcggcggcttgcccaattacctgaatgatgac
caggtgaaggagctgctgacatcattcggtcccctgaaggccttcaacctggtgaaagac
agtgctacaggcctgtctaaaggatacgccttctgtgaatatgttgacgttaacctgaac
gaccaggccattgctgggctgaacggtatgcagctgggagacaagaagctgctggtgcag
agagccagcgtgggatccaagaacgccactctgacgagtataaaccagactccagtgacg
ctgcaggttcctgggctgaacagctccgtcacccagatgggcggcgtgcccactgaggtg
ctgtgtctgatgaacatggtggcaccagaagagctcctggacgacgaagagtacgaggag
atagtggaggacgtccgagacgagtgcagcaagtacggccaagtgaagagcatcgagatc
ccccgaccagtggacggcctggaggtgcccggcaccggaaagatctttgtggagttcatg
tcagtgtttgactcccagaaggccatgcagggtctgacaggacggaagtttgccaacagg
gtggtggtgaccaaatactgcgacccagacgcgtatcaccgccgggacttctgg

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