Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015717G001
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Entry
GSTEN00015717G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00015717G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00015717G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
RNases
GSTEN00015717G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CAF98127
UniProt:
Q4SMK5
LinkDB
All DBs
Position
18
AA seq
270 aa
AA seq
DB search
MGKKERRSPPQNLSRPRDRKPCRKKKVRALNVVIVEGLTQSHFYKHYLSLPHLTSRYTTV
HVASAIFSSQLSGSDFLFRHQTHPLDKGLPGLEEFVCTDSADHATDSSPLFGLDCEMCWT
EKGLELARVSLVDSDGRCLLDELVKPQNHILDYLTCFSGITAAMLSPVTTTLRDVQVQLR
SLLPSDAVLVGHSLNNDLKALKLIHRHVLDTSLLYRGQCGQRFKLKVLAQVVLKRKIQTD
DRKGHDPTEDALAALELAQYFIQMGPRRVI
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaagaaagaagatctccccctcagaacctgagcaggccaagagacagaaaa
ccctgcaggaaaaagaaggtgagagctttgaacgtggtgatcgttgagggtttgacccag
agtcacttttacaagcattacctcagcctgccccacctgaccagcagatacaccactgta
cacgtagcatcggccatcttcagcagccaactctcgggatcagacttcctgttccgccat
caaacacatccgttggacaaaggactgccgggccttgaagaatttgtgtgcacagacagt
gctgaccatgcgaccgacagcagcccgttgtttggactggactgtgaaatgtgttggaca
gaaaagggcctcgagttggctcgggtttccttggtggacagtgatggaagatgtttgctg
gatgagctcgtgaaacctcagaaccatattctcgactacctcacctgcttctctggtata
accgcggccatgctgtcgccggtcacgaccacgctgagggacgttcaggtgcagctccgg
agcctgttgccgagcgacgccgttttggtcggccattcgctcaacaacgatctcaaggct
ttgaaactgatccaccggcacgtgttggacacctcgctgctgtacaggggccagtgtgga
cagaggtttaaactcaaggtcctggcccaagtggtgctgaagagaaaaatacaaacggac
gacaggaagggacacgatccaaccgaggacgctctggctgccttggagctggctcagtac
tttattcaaatgggacctcgcagggtaata
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