KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015824G001
Entry
GSTEN00015824G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00015824G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00015824G001
Spliceosome [BR:tng03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GSTEN00015824G001
 Complex B
    GSTEN00015824G001
SSDB
Motif
Pfam: zf-CCCH RRM_1 RRM_MUD2_C Torus zf_CCCH_4 Su_sable_N zf-CCCH_2
Other DBs
NCBI-ProteinID: CAF98200
LinkDB
Position
3
AA seq 227 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRRRDRERRRSRDRERYGRF
NT seq 681 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcatccattttcggcacagaaaaagataaggtcaattgttccttc
tattttaaaattggagcttgcagacatggagaccgctgctcaagactgcacaacaaaccc
actttcagccagactatcctgatccaaaacatctaccgtaatcctcagaacagtgcacaa
acagctgatgcctcgcgatgcgctgtcagtgatgtggaaatgcaggagcactacgatgag
ttctttgaggaggtgttcacagagatggaggagaagtacggcgaggttgaggagatgaac
gtgtgtgacaacttgggcgaccatcttgtgggcaatgtttatgtcaagttccgccgggag
gaggacgccgagaaagcggtcatggacctcaacaaccgttggttcaacgggcaacccatt
cacgccgagctctcccccgtcactgacttcagggaagcttgctgtcgccagtacgagatg
ggagagtgtactcgaggcggtttctgcaacttcatgcacttgaagcctatatcgagagaa
ctccggcgggagctgtacggccgccgcaggaaaaggcaccgctcccgttcacgctcccga
gaaaggcgttcccgctccagggaccgacgacgggatcgtgaaagacgaagatcgagggat
cgagagcgttatggacgattc

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