Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015980G001
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Entry
GSTEN00015980G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00015980G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00015980G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
Glutaredoxin2_C
Motif
Other DBs
NCBI-ProteinID:
CAF98320
UniProt:
Q4SM12
LinkDB
All DBs
Position
13
AA seq
1504 aa
AA seq
DB search
MDPKGPSAAFKRSSLKRSTSGSQKIAKSLAPIYLSVHLKAFKIIKLSTEEVSCPVGFNES
TRAGVQQRDRLGQGGSGAEGSLSHPQTGPRSLATRLSAQKVWIERNFLKRECIHIFPTKD
PTRCACGQLTTQHVAIPPGANSVEEAIQLVQIDTPKDKWSLIKHTRTYPTDAFGVIEFQG
GGFINKAMVRLFPSAFGRRKGMKGAKSRHLRGLCDDTTPLLPQYIRVSYDTKPDNLLHLM
VKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAVTTGAWIFTGGVNTGVIRHV
GDALKDHSSKSRGKVCAIGIAPWGILENKEDLIGKDVTRSYQSMANPLSKLAVLNSSHSH
FILTDNGTCGKYGSEVKLRRLLEKHISLQKINTRTYPSGSAPSILCGLGQGVPLVCLIVE
GGPNVISIALESLRDEPPIPVVVCDGSGRASDIISFAHKFSEDGGLVNDDVREQLLVTIQ
KTFNYSKSQSQQILLMVMECMKKRELITVFRMGSEGQQDIEMAILTALLKGTNASAADQL
SLALAWNRVDIARNHIFVYGHNLPPAGSVVNRAASTVQTQEKPKSPVSAPRARGKKAKGK
GKAKPEPPEETDPRKLEMIRWVNSLEQAMMDALVLDRVDFVKLLLENGVNIHHFLTIPRL
EELYNTKLGPANTLNAVVRDVKKGNLPPDYQITLIDIGLVLECFMGGAYRSNYTRKAFRN
LYNNLYGLKRPKALKLLGMEDDEPRPKGKKKPKKKKEEEVEIDVDDPEVCRFKYPFHELM
LWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHECSESELVDDISQDLENNSKSV
RQTLKANNKMITPVRTGPFSLVHREFGQLAYELLDQSYKHDEQVAMKLLTYELVNWSNST
CLKLAVAAKQRDFIAHTCSQMLLTDMWMGRLRIGKNPSLKVILGIIFPPLILLLDFRLGD
DVSFRAPGGKEDGKDKDDDTKSSRDPNPDATSRKGDEEEGSANVRKIPIGKRFFEFYDAP
FTKFWFNTISYLGYLMLYNYIILVKMERWPSIQEWIVISYILTLGTEKVRQILMSEPGKL
KQKISVWLEEYWNITDLAAICTFLLGLMLRLQQEPYMGYGRVIYCIDIIFWYIRVLDIFG
VNKYLGPYVMMIGKMVICELVGTFLVGANMIPVIVFVRVSCAQMIDMMYFVVIMLVVLMS
FGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGEHLYDEDG
KRLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIM
TFHDRPILPPPLIILSHLYILCNRMFRKCAKKKQDGELDEKDRGLKLRLNPEELKSLYEF
EEQCVEEYFREKEDEQQSSSSERIKVTSERVENMFMRLEEVNERENTMKASLQTVDLRLA
QLEEIHGRMAVALEKLAGVDRLELTRTYSRNSSVCDPSSLHRQGSINSADDYSLYRFHMD
MEEF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaaaggtcccagtgctgcttttaaacgctcttcactgaaacgctccacatct
ggctcgcagaagatcgccaaaagtttggcccccatctatctaagcgtgcacctgaaagcc
tttaagatcattaagctcagcactgaagaagtttcatgtcctgtgggattcaatgagagc
actcgagcgggagtgcagcagcgggaccggctcggacagggcggcagcggcgctgagggc
tccctctcgcatccacagacaggaccccgcagcctggcaacacggctttctgcacaaaaa
gtctggattgagagaaactttctgaagagagaatgcattcacatatttcccaccaaggac
ccaaccagatgtgcctgtggtcaactgacaacgcagcacgtggccatccctcccggcgcc
aactcagtggaggaggccattcagctggtgcagattgacacgccgaaggacaaatggagc
ctgatcaagcacaccagaacctacccgacagacgccttcggggtaatcgagttccagggc
ggaggattcatcaacaaggccatggtgagactcttcccctccgcctttgggcgtagaaag
ggcatgaaaggagcgaaaagccgtcatttgcgtggactctgtgacgacaccactcccctc
ctcccccagtacatccgcgtgtcctatgacaccaaaccggacaacctgctgcatctgatg
gtgaaggactggcagctggagctgcccaccctgctcatctctgtgcacggaggcctgcag
aacttcgacctgcagccgaagctcaagcaggtgttcggcaaaggcctgatcaaagctgcc
gtcaccacgggggcgtggatcttcacgggcggagtcaacaccggggtgatccgtcatgtc
ggagacgccttgaaggaccactcctccaagtcacgaggaaaagtgtgtgccataggaatc
gctccctggggcatcctggaaaacaaagaggacctcatcggaaaagacgtaaccagatcc
tatcagtcgatggcgaacccgctgagcaagctggctgtgctcaacagcagccactcgcac
ttcatcctgacagacaacggcacctgcgggaagtacggttccgaggtcaagctccgccgg
ctcctggagaagcacatctccctgcagaagatcaacacccgtacgtacccgtcaggctcc
gccccttccatcctgtgtggcttgggtcagggggttcctctggtgtgtctgatagtggag
ggaggtcccaacgtgatctccatcgccctggagagtctgagagacgagcctcccattcct
gtggtggtgtgcgacggcagcggtcgcgcttcggacatcatttccttcgcgcacaagttt
tcggaggatggaggcctggtgaacgacgacgtcagagagcagctcttagtcaccatccaa
aagactttcaactacagcaagagtcagtcgcagcagatcctgctgatggtcatggagtgt
atgaagaaacgggagctgatcacagtttttcgaatgggctctgagggacagcaggacatc
gaaatggccattctcacggccttgttgaaaggcacaaacgcatctgcagcggaccagctc
agtttggctctggcctggaacagagtggacatcgctcgcaatcacatctttgtttatggc
cacaatttaccgcctgctggctccgttgtcaacagggcagcctccacggtccagacccag
gaaaagccaaagagtcctgtcagtgcacctcgcgcccgaggaaagaaggcaaaggggaag
gggaaggcaaagcccgagcctccggaggagacagaccccaggaagctggagatgatccgc
tgggtcaactctctggagcaggccatgatggacgctctggtgctggacagggtggacttt
gtcaagctgcttctggagaacggggtcaatattcatcacttcctcaccatccccagactg
gaggagttatacaacacgaaacttggacctgcgaacacgctgaatgctgtagtccgggat
gtcaaaaaagggaaccttcctcctgactatcagatcactctgattgatattggtttggtc
ctggagtgcttcatgggtggcgcgtacaggagcaactacaccaggaaggctttccgcaac
ctctacaataatttgtatggactaaagaggccaaaagctctgaagctcctgggaatggag
gatgatgagcccagaccaaagggcaagaaaaagcccaaaaagaagaaagaagaggaggtg
gaaatcgacgtggatgaccccgaagtctgccgcttcaagtaccccttccacgagctgatg
ctgtgggcggtgctgatgaagcgccagaaaatggcgctgttcctctggcagcgtggagaa
gaagccatggccaaggcgctggtggcctgcaagctgtacaaagccatggcccacgagtgc
tcagagagtgagctggtggatgacatctcccaggacctggagaacaactcaaagtccgtc
cgccaaacattaaaagcgaataataaaatgattacaccggtgaggactggaccattttct
cttgttcacagagaattcggccagctggcctatgagctgctggatcagtcctacaagcat
gatgaacaggtggccatgaaactcctgacctatgagctggtcaactggagtaactccacc
tgtctgaagctggctgtcgcagctaagcagcgggacttcatcgcccacacctgcagccag
atgttgctcaccgacatgtggatgggccgcttaaggatcggcaaaaaccccagcctcaag
gtgattctgggaatcatcttcccaccattgattcttctgctggatttccgtctgggggat
gacgtctcctttcgtgcacccggaggaaaagaggatggaaaggacaaggacgacgacacc
aaatccagcagggaccccaacccggatgcaacttcccgaaagggagatgaagaggaggga
agcgccaatgtccgcaaaattcccatcggcaagaggttctttgagttttacgatgcaccg
ttcaccaaattctggttcaacacgatttcctatttgggctatttgatgttgtacaactac
atcatcttggtgaaaatggagcgatggccatcgatacaagagtggattgtcatttcatac
atcctgacgttaggcactgagaaagtcagacagattctgatgtctgagccagggaagctg
aaacagaagatcagcgtgtggctggaggaatactggaacatcaccgacctggctgccatc
tgcacttttcttctcggcctgatgttgaggttgcagcaagaaccttacatgggatacggg
agagtcatctactgcatcgacatcattttctggtacattcgcgtgctggacatcttcgga
gtgaacaaatacctggggccctacgtgatgatgatagggaagatggtaatttgtgaattg
gtgggcacatttctggtcggagccaacatgataccagttattgtttttgtgcgtgtttct
tgtgctcagatgatagacatgatgtactttgtggtcatcatgctggtggtgctgatgagc
tttggggtggctcgtcaggccatcctacaccccgatgaggagccgacgtggcgcctggcc
aggaacatcttctacatgccctactggatgatctatggggaggtttttgcagactcgata
gacctctatgcaatggaaattaaccctccctgtggtgagcatttatatgatgaggacgga
aagaggctgcctccatgtatccccggtgcctggctgacgcctgctattatggcctgttat
cttctggtggcaaacattcttctggtcaacctgcttatcgcagtgttcaacaacacgttc
ttcgaggtcaagtccatctccaaccaagtgtggaagttccagagataccagctgatcatg
acgttccatgaccggcccatcctccctccacctctcattatcctgagtcacctctacatc
ctctgcaacaggatgtttcgcaaatgtgccaagaagaaacaagatggagagttggacgag
aaggaccgggggctcaaactgaggctgaatccagaagagctgaaaagtctgtacgagttt
gaggagcagtgcgtggaggagtatttccgggagaaagaggacgagcagcagtcctccagc
agcgagcggatcaaggtcacctcggagagggttgagaacatgtttatgcgcctggaggag
gtcaacgagagggagaacaccatgaaggcctcgctgcagactgtggatctgcgcctggct
cagctggaggagatccacgggcggatggctgttgccctggagaagctcgcaggcgtggac
aggctggagctgaccaggacctactcccggaactcctccgtgtgcgacccttcctccctg
caccgccagggcagcatcaacagtgctgacgattacagtctttaccgcttccacatggac
atggaggagttc
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integrated database retrieval system
