Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015989G001
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Entry
GSTEN00015989G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20166
TBC1 domain family member 2B
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00015989G001
Membrane trafficking [BR:
tng04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
GSTEN00015989G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_8
PH_11
HAP1_N
PH_6
DUF7491
AAA_13
Baculo_PEP_C
Hydro_N_hd
Motif
Other DBs
NCBI-ProteinID:
CAF98328
UniProt:
Q4SM04
LinkDB
All DBs
Position
13
AA seq
1057 aa
AA seq
DB search
MHEETDGSESQPRAASRIVASRSVDVAEVEAGTVPKLCGYLTKLSGKGPLRGYKPRWFVY
DPRKCYLYYFKTPQDALPLGHIEIGDACFSYDVEAEEGQFAIYTGGKEFLLKAPSRQAMH
YWLQQLQQKRWEYSSTRGQRDSWSSPTLPHPLTGLVGKDSNTGSEASVSLEILRSDFAME
AEMDCGLTSGAQPPRGNAAVSTNPLNSLRNIGTELRNSMSYLRGRGGENRRSVFYTGNSN
AEEWELVDAPPKDFTEQKPPDAHRHSFGSAFNFDFVRNPSRPKRLPGRDMMGSWKLRSPE
SSPVEPNGGKASDPRLQGQQQEAAALRDELAAQKVPLSLRWGTNCTDKPSEQLKRCRYHG
DKVVTCGLSSEQELVRLLQQTLRTSQCSRQPAAETPASADHAQGAEAPQEPAGRLETLLQ
ERDEQVQALSGHMERLTLERDSLQQELKSLKMKVGEINDKLGMLMETIEAKDEMIMKLSQ
SSEQGAGGNEAASSAPIRAQQEVDVLKDSLQGYKSQNKFLNKEILELTELRRNAENREKA
LEAKCTALEAKLCQVECKYLVLLQEVKTPVCSSSEQSQAHEVISRLLEDALQAVALRPTG
SAHLQAQHRQEVSVGVKWENYLAGMLNRDLVRSPELKALIRCGVPHEHRSRVWQWCVSSR
VKKFRDNLEPDYYETLLNVARDKPNPASKQIELDLLRTLPNNKHYSSPGAGGIQKLRNVL
MAFSWRNPDIGYCQGLNRLAAIALLYLDQEDAFWSLVAIVEVFMPRDYYTKTLLGSQVDQ
RVFRDLMSEKLPRLHAHFEQHKVDFSLITFNWFLVVFVDSVVSDILFKIWDAFLFEGPKV
RSRTVRTCLQLSLVLSQAVWNEFSGRWRNNLTRRLPDLTPAECELLQTACSQEVQVQPPE
IPIRLAFLTPKLSFTHQKKAGPFASLAAAVRSLVCLRPVLLHSFTCFPFFAQIIFRFALS
LFKYKEEEFLKLQDSTALFKYLRYFTRTILDSRKLMNIAFMDMNPFPMRQIQNRRSFHLE
KVRLELTELEAIRQTFLRERETSQDRRSFVSDDEEEN
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagaaacagatggcagtgagtcacagcctcgcgcagcttcgcggatcgtcgcc
tctcggtcggtggatgtggccgaggtggaggcggggacggtcccgaagctgtgcggatac
ttgactaaactgtccggcaaggggcctctgcgggggtacaagccgcggtggttcgtgtat
gatccccggaaatgttacttgtattacttcaagacgccccaagacgcgttgccgctcggg
cacatcgagatcggcgatgcgtgtttcagctacgacgtggaggccgaggagggtcagttc
gccatctacacgggcggtaaagagttcctcctgaaggcgcccagcagacaggcgatgcac
tactggctgcagcagctgcagcagaagcgctgggagtacagcagcacgcggggccagagg
gacagctggtcctcccccaccctgcctcaccccctcacgggcttggtgggcaaagacagt
aacacagggtccgaagcgtccgtcagcctggagatcctccgcagcgacttcgccatggag
gcagaaatggactgcgggctgacgtcgggcgcccagccgcctcgaggcaacgccgccgta
tccacaaaccccctgaactcgctccgaaacatcggcacagagctcaggaactccatgtct
tatctgcgagggagaggaggcgagaacaggcggagtgtgttttacaccggcaacagcaac
gcagaggagtgggagctggtggacgctccacccaaggacttcaccgaacagaagcctcct
gacgcgcacaggcattccttcggatcggcttttaatttcgactttgtgcgcaacccctcg
cgacccaagaggctcccgggccgagacatgatgggctcctggaagctgcggagtcccgag
agctcgccggtggagcccaacggcggcaaggcttcggatccgcgtctccaggggcaacag
caggaggcggccgccctcagggacgagctggccgcacagaaggtgcccttgtcgctccgc
tgggggacaaactgcacagataaacctagtgagcagctcaaacggtgccgttaccacggt
gacaaggtggtgacctgtgggttgtcctctgaacaggagctggtgagactcctgcagcag
accctgaggacgtcccagtgcagccggcagccggcggcggagacgccggcgtccgccgac
catgctcagggcgccgaggcgccgcaggaaccggccgggcgtttggagacgctgcttcag
gagcgagacgagcaggtccaggcgctgagcggccacatggaacgtctcaccttggagagg
gacagtctgcagcaggagctgaagagcctgaagatgaaagtgggcgagataaacgacaag
ctggggatgctgatggagaccatcgaggccaaggatgagatgatcatgaagctgtcgcag
agctccgagcagggcgccggcgggaacgaggctgcttccagcgccccaatccgagcccag
caggaggtggacgtcctgaaggacagtctccaaggctacaaatcccaaaataagttcctg
aacaaagagatcctggagctgacagagttacgcagaaacgcagagaaccgagagaaggcc
ctggaggcaaagtgcacagcgctggaggccaagctgtgccaggtggagtgtaagtacctg
gtgctcctccaggaggtgaagacccccgtgtgctcgtcctcggagcagagtcaggcccac
gaggtcatctccaggttgttggaggacgcgctgcaggcggtagccctccgaccaaccgga
tcagcacatcttcaagcccaacaccgtcaggaggtgtccgtgggggtcaagtgggagaac
tacctggccggcatgctgaaccgggacctggtgcgctcccccgagctgaaggccctgatc
cgctgcggcgttccccatgagcaccgctcccgggtctggcagtggtgcgtctcctcccgc
gtcaagaagttccgggacaacctggagcccgactactacgagaccctgctgaacgtggcc
cgggacaagcccaacccggcctccaagcagatcgagctggacttgctgcgcactttgccc
aacaataagcactactcctccccgggtgcgggcggcatccagaagctccggaacgtcctg
atggccttctcctggaggaatccagacatcggatactgccagggactcaacagactcgcg
gccatagcgctgctgtatctggaccaagaagatgccttctggagcctcgtcgccatcgtg
gaggtcttcatgcccagggattattacaccaagacgctgctcggctcacaggtggatcag
cgcgtgttccgggacctgatgagcgagaagctgccgcgcctccacgcccacttcgagcag
cacaaggtggacttctccctcatcaccttcaactggttcctggtggtgtttgtggacagc
gtcgtgagcgacatcctgttcaaaatctgggacgccttcctcttcgagggtccaaaggta
cgcagccgtaccgtgaggacctgcctgcagctgagtttggttctgtctcaagcagtttgg
aacgagttcagtggtcggtggcgtaacaacctgacacgtcggcttcctgatctcacacca
gccgagtgtgagctcctccaaactgcttgtagccaggaagtccaagtacagccaccagaa
attccgattcgtttagcttttttgacaccaaaactaagttttacacaccaaaaaaaagct
ggtccctttgcttctttagcagcagcagtcagaagtctcgtctgccttcgaccagttttg
ctccactcgttcacgtgtttccccttttttgcacagatcatatttcgctttgctctctca
ctcttcaagtacaaagaggaggagtttttgaagctgcaggattcgacagccctctttaaa
tatctgagatacttcacacgcacaatcctggattccaggaagctgatgaatattgctttc
atggacatgaacccgtttcccatgaggcaaatccagaaccggcgatccttccacctggag
aaagtccgcctggagctgaccgagctggaggccatcaggcagacgttcctccgggagaga
gagaccagccaagacaggcgcagcttcgtcagcgacgacgaagaggaaaactga
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integrated database retrieval system
