Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016008G001
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Entry
GSTEN00016008G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
GSTEN00016008G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00016008G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
GSTEN00016008G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
GSTEN00016008G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4_2
Rcat_RNF216
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-RING_14
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-ProteinID:
CAF98343
UniProt:
Q4SLY9
LinkDB
All DBs
Position
13
AA seq
600 aa
AA seq
DB search
MDSDEGYNYEFDDEEECSDDSAEEEPEDDTLELGEVELVDPVVAGGERDECGDTWRRWPW
SRRGGRGGLPFRGFDCRANPTAYGGVHQGGQRGHSGRYFGVSVSGKTGVQVWVKLQQAFE
FSLAVSRQSTLAYLLEVCIFNTRLQFITVFVSEGIPGTRVLQADVANNPVTITRILLSHF
NWDKEKLMERYFDGNLDKLFSECHVINPSKKPRNRPPINTRSSAQDMPCQICYLNFPNSY
FTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLK
YHHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKC
KWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG
PWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQ
VKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQAD
LENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgaagggtacaactatgagttcgacgacgaagaggaatgtagcgacgac
agcgccgaagaagagcccgaggacgacaccctggagctcggcgaagtggagttggtcgat
cccgtggtggccggtggagagcgagacgagtgtggcgacacttggcggaggtggccatgg
tcccggcgaggaggacgaggaggactaccgtttcgaggttttgactgccgagcaaatcct
acagcatatggtggagtgcatcaaggaggtcaacgaggtcattcaggtaggtattttggt
gtgtcagtgtcaggaaagaccggggtccaggtttgggtgaagcttcaacaggcctttgaa
tttagcttagccgttagccgtcagagtactttagcctacttgctggaagtttgcattttc
aacactcggctacaatttattacggtatttgtctccgaagggattcctggcacacgtgta
ctccaagctgatgttgcaaacaatcctgtaacaataacgcgcatcctactcagtcatttt
aactgggacaaagaaaagcttatggaaaggtattttgacggcaacctcgacaagcttttc
tctgagtgccatgtcattaaccccagtaagaagcctcgaaaccgtcctccaatcaacact
agatcatcagcacaagacatgccctgtcagatctgctatctaaacttcccaaactcttat
tttacaggacttgagtgcgggcacaagttctgcatgcagtgctggggagattacctgact
accaaaattatagaagaaggaatgggacagactatttcttgtcctgctcatagttgtgac
atcttggttgacgataacacagtgatgcgcctcataaccgattcaaaggtgaaattgaag
taccaccatttaatcacaaatagttttgtagagtgcaaccggttgttaaagtggtgccct
gcaccagactgccaccatgttgtcaaagtccagtatccagatgccaaacctgtgagatgc
aagtgtggtcgtcagttttgctttaactgtggggagaactggcatgaccctgtgaagtgc
aagtggttaaggaagtggataaagaaatgtgacgatgacagtgaaacctccaactggatt
gcagcaaatactaaggagtgtccaaaatgccacgttacaattgagaaggatggcggctgc
aaccacatggtgtgtcggaaccagaactgtaaagccgagttttgctgggtctgcctgggc
ccgtgggaaccccacggctctgcatggtacaactgcaatcgctacaacgaagacgatgca
aaggcagctcgagatgctcaagagcgttccagagctgctttacagaggtacctgttctac
tgcaaccgctacatgaaccacatgcaaagcctgcgctttgagcacaagctctacgctcag
gtgaagcagaagatggaagagatgcagcagcacaacatgtcctggattgaggtgcagttt
ctgaagaaggccgtggacgtgctctgccagtgccgctccacactcatgttcacctacgtc
tttgccttctacctcaagaagaacaaccagtctattatttttgagaacaaccaggcagat
ttggaaaatgccacagaggtgctctctggctacttagaacgagatatctcccaggattcc
ttgcaggacattaagcagaaagtacaagataaatacagatactgtgaaagcaggcgaaga
gtgctgctacagcatgtgcatgaaggctatgagaaggacctgtgggagtacattgaggat
tga
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integrated database retrieval system
