Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016076G001
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Entry
GSTEN00016076G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00016076G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00016076G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
GSTEN00016076G001
REST complex
GSTEN00016076G001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTEN00016076G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-ProteinID:
CAF98397
UniProt:
Q4SLT5
LinkDB
All DBs
Position
13
AA seq
1323 aa
AA seq
DB search
MKRRVEDQETVFASQQRRLTGNTEAFQHRVLAPAPAPTVYEPVSDNMQPTAGVQYSVTQG
YQVAQNSGGHGHTPNPAVHGVAHHHSPAVQAHGPSVMSGHGHTAAPQASAQGQQFQRLKV
EDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFN
TFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAAAQHPAQLPPAPTTTAP
PLLTQPTPAKMTKPLQPQALTPSGQSNPSIPPYTSPRSPPMQLHQPLSGTPTGPPIQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANNSVVGRAATPSPTSASVLRALPKIAFTYRPQLLNKT
TAEKAESVRNDHGGTAKKLQLNNKQRPSQNGCQIRRHPTPGATPPVKKKPKLLNLKDSSV
AEVSKHGVGTESLFFEKVRKALRSAEAYDNFLRCLVIFNQEVVSRAELVQLVLPFLGKFP
ELFNWFKNFLGYREMSHIETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTG
RTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLAAIRA
LETVQRKLSRMSAEEQAKLRLDNALGGSSEVIHRKAIQRIYGDKAPDIIDGLKKNPAVSV
PIVLKRLKTKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNE
IESIYDERQEQASEENASPLSGPHLTLAYEDSQILEDAAALIIHHVKRQTSIQKDDKYKI
KQIIYHFIPDMLFAQRGELSDVEEEEEEEEMDLDEGASKKHNGVPGSGSPSKSKLLFSNT
AAQKLRGCDDAYNLFYVNNNWYIFLRLHQTLCARLLRLYTQAERQIEEEVREREWEREVL
GLKKEKNDNPAVQLRLKEPSEYLATTAQCDCYYSWEKSNVFFPAVDIEVEDYYSAFLEMV
RNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLS
ESANSASGGSLSSQSSRSSAETAYQRKAEQIMSDENCFKVMFLKSKGQVQLSVELLDTEE
ENSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRQNLRRIRKYQKGREQLDK
EACESGKKSLEKEKMECMFQLNSYKMVYVFKSEDYMYRRTALLRAHQSHQRVSTRLHKRF
QAWVDAWVAEHVTRDMNAETNKWLMGEGREGFIPCTTTRQPEVLHFVNINKYQVKYASPT
KAP
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggagagtggaggatcaggaaacagtttttgcgtcccagcagcggcgcctcact
ggcaacacggaagcctttcagcatcgtgtcctggcccctgctcctgccccgactgtgtat
gaacccgtttctgacaacatgcagcccacagcaggtgtccagtactcggtcacccaggga
taccaggtggcccagaacagcggagggcacggacacactccaaacccagctgtccacggt
gtagctcatcatcacagcccggcagtccaggcccacgggccctcggtgatgtccggacac
ggccacaccgctgcgcctcaggcttctgcacaaggccagcagtttcaacggcttaaggtg
gaagatgctttgtcctacttagaccaagtgaaactgcagttcggcaaccagcctcaggtc
tacaacgactttctggatataatgaaggagttcaaatctcaaagtattgacacccctggg
gtcatcagcagagtgtcccagctcttcaaaggccaccctgacctcatcatgggctttaac
accttcctgccgcccggctacaagatcgaagtccagaccaacgacctggtcaacgtgact
acacccggtcagatccaccacatcaccccgcatggcatctcggtccagaacatcccgata
accggagcagccgcccagcatcccgcccagcttccgcccgctccaaccaccactgctccg
cccctgctgactcagcccacacccgccaagatgactaagcctctccaacctcaggcattg
acaccaagtggtcagagcaatccgtccatccctccgtacacctctcctcggtccccgccc
atgcagctccaccagccgctcagcggaacccccaccggacctcctattcagaacaatcaa
ccagtggagttcaaccacgccatcaactacgtcaacaagatcaagaatcgcttccagggc
cagcctgacatctacaaagcctttctggagatcctccatacctaccagaaggagcagcgc
aatgctaaagaggctggcgggaactacacaccagccctgacagagcaggaggtgtatgct
caggtggcccgactcttcaagaaccaggaggacctcctctcagagttcggccagtttctt
cctgatgccaacaactctgtggtaggaagagctgcgacccccagcccaacctccgcgagc
gtgctccgcgccctgcctaaaattgcttttacgtaccgtccacagctgttaaataagacc
acggctgagaaggcggagtctgtacggaacgaccacggcggcacggccaaaaagctgcag
ctcaacaacaaacagagacccagtcagaacggctgccagatccgccgtcatccaactcca
ggagccacaccccccgtcaagaagaagcccaagttactgaatttaaaagattcctcggtg
gcggaggtcagcaagcatggagtcgggacggaatctttgttctttgagaaggtgcgcaaa
gctttgcgaagcgcagaagcttacgacaacttcctgaggtgtctggttatctttaatcag
gaggtggtctccagggctgaactggtgcagctggtgcttccgtttttaggaaaatttcct
gagttgttcaactggtttaaaaactttcttggctatcgggaaatgtcccacattgaaacg
taccctaaggaacgggccaccgagggcatcgctatggagatcgattatgcttcctgtaag
aggctgggctccagttacagagccctgcccaaaagctaccaacagcccaagtgcactggc
agaactcctctttgtaaagaggtcttgaacgacacctgggtgtccttcccctcctggtcc
gaagactcaacatttgttagctcaaagaagactcagtatgaggagcatatctacagatgt
gaggatgagcgtttcgagttggacgtcgtgctggagaccaatctcgctgccatcagagct
ctggaaacagtccagcgaaagctgtcacgcatgtctgcagaggaacaggccaagctacgc
ctggacaacgcgctgggcggttcctcagaggttatccaccgcaaggctatccagaggata
tatggagacaaggcccccgacatcatcgacggcctgaagaaaaaccccgctgtttctgtc
cccatcgtcctaaagaggttaaagacgaaggaggaagagtggcgggaagcccagcgtggc
tttaacaagatctggagggagcagaacgagaagtattacctcaaatcgctcgaccatcaa
ggcatcaacttcaaacagaacgacaccaaagtgcttcggtccaagtccctgttgaatgaa
attgaaagtatttatgatgagcgtcaggagcaggcgtctgaggagaacgcttctccgctc
tcaggcccccatctgactctagcgtacgaagacagccagatcctggaagacgccgccgcg
ctcatcatccaccacgtcaagcgtcagaccagcattcagaaggacgacaaatacaagatc
aagcagatcatttaccacttcatcccagacatgctgttcgcccagcgcggcgagctctcc
gacgtggaggaggaggaggaggaggaggagatggatctggatgaaggggcctccaaaaag
cacaacggggtcccggggagcggaagcccctccaagtccaagctgctgttcagcaacacg
gcggcgcagaagctgcgcggctgtgacgacgcctacaacctcttctacgtcaacaacaac
tggtacatcttcctgcggctgcaccagacgctgtgtgcacgcctgctccggctctacacc
caggcagagcggcagatcgaagaagaggtgagggagcgggagtgggagcgggaagtcctg
ggcctgaaaaaagagaagaacgacaatccggctgttcagctgagactgaaggagccaagt
gagtatttggctaccactgcccagtgtgactgttattacagttgggaaaagtccaatgtt
tttttccctgcagtggacattgaagtggaagattactattcagccttcttggagatggtg
aggaatttgctggatggaaacatggaggcctcccagtatgaggactccctgagagaaatg
ttcaccatccacgcttacatcgccttcaccatggacaagctcatccagagcatcgttcgg
cagctccagcacatcgtcagcgatgagatctgtgtccaggtaaccgacctctacctctcg
gagagcgctaacagtgcaagcggagggtccttgtcctcccagtcttcacgcagctccgca
gagactgcctaccagcggaaagctgagcagatcatgtcagacgagaactgcttcaaagtg
atgtttttgaagagcaaaggacaagtgcagctctcagtggagctgctggatacagaggag
gagaactctgatgaacccatggaggcggagcgctggtctgattatgttggacgctactta
aacccagattcaaccacaccagagttgagggaacaccttgcccaaaagccagttttcctt
cccaggcagaatctgagacgaatcaggaagtaccagaagggccgagagcagctggacaaa
gaggcgtgtgagagtggcaagaaatccctagaaaaggagaaaatggagtgcatgttccaa
ctcaactcttacaagatggtttacgtctttaagtctgaggattacatgtaccgacgcact
gccctgttgagagcccatcagtcccaccagagggttagcacgcggctgcacaagcgtttc
caggcctgggtggatgcttgggtcgcggagcacgtgacccgcgacatgaacgctgagacc
aacaagtggctgatgggtgaagggcgcgaaggcttcataccctgcaccaccacccgccag
ccagaagtccttcacttcgtgaacatcaacaagtaccaagtgaaatacgcctcacccacc
aaggcgccg
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