Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016172G001
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Entry
GSTEN00016172G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00016172G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tng01009
]
GSTEN00016172G001
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00016172G001
03029 Mitochondrial biogenesis [BR:
tng03029
]
GSTEN00016172G001
Protein phosphatases and associated proteins [BR:
tng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTEN00016172G001
Membrane trafficking [BR:
tng04131
]
Autophagy
Autophagosome formation proteins
ULK complex
GSTEN00016172G001
Mitochondrial biogenesis [BR:
tng03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
GSTEN00016172G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-ProteinID:
CAF98458
UniProt:
Q4SLM4
LinkDB
All DBs
Position
15
AA seq
1535 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMVVERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLEDCTISYQKLLLKFETSYLNYQQ
DLEEIKTKLSKSVCVGARARLGMAVSVMARIPLLECLTQQSYRESMEKSSSTPEKDSDET
EEEEKSTDSVLRSSKTPSGEPEASEMADSGGLRAILDEAANPSCFNVTLLDWINVQDRPN
DVESVVRKCFDSINRVSGSRQGAVELLQRGPDLASSLQLDPRIIQPFLADCRDTIAKLDN
QNMKSIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSH
TNQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKVQALLRLL
TELMERVRAVEALSNVPQMYCLAVVEVVRRKMFMRHYREVRAWSRSPPPPPRFSASLPRL
WWHICLSSPSQWAYSLVKDGKLLYDAEKLKRESFGKLFRKSFLRNRLFRGLDSWPPKSFC
TQKPRRFDDELPDISVEDLQYLKSCCPAEVQPFLMVPALCDFEPLNRHVDALHHLVQAAQ
SVDEMSQTITDLLSEQRESYSRSSHRSTALTPQSESGPGTATSASSKTPPSLSLQGTSCQ
ALHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPESDFMSAVN
EFVIEENLTSPNPISVPTSPEMMVESLYSSVINAIDNKRMQDTTTLERENARVAALRRVI
DRYQSAAEETQAGVRSVRDDLCHLRTVVLKEQQDFALVMRSVSSEVRGVCQARQSQLRER
HQNELLSLRQELQKQVQTLTEENQVNQNIVRDVQRAMLELEGLLERKEKELVQLQSEKDQ
LAVLESQQRDLVLNLQQVTSSQAEEIRTLSASRGSLADQLKDLRSEIERSQKEIREKLEV
DKQTQLKELEDQLKRQHQAELERLGERNRKALEDLAAESGAKLCETLDQHASVLREKDRQ
IKDSECRGAELAELRCKLEVELALKESETEELRRSFEDAKAQQAEAVRSRVESETRDLSD
ELACVKKQLQAKNEEYEVDLSELRTLMRIEKDHCISELVDRYDEEAAALRGESTCLRERL
EDATRNHAEQWQKLRQEAEQEKGKQRSSFQELEQELRTVISNLQAENGLLSKKLDRHARE
KDSGEVLSSDALKDLQQQKDDTEKKLLEKIRQLEKELQGRQSSKSADAAAPRSLDSAIQE
HLQQERASLQSQMELLEKQKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQVISELTEK
LRKVTQQQEKDKALIETLSEDRASVMQEKKHLEEELNRLRGATLVSSAFFATNPSGQELP
HAKAEAGARALPGGGACPSEPETDRLASVAAIREDEGVDSAVEASMVTVHENILMSEEKQ
RILLLERTLHMKEEENKRLSQRLVSSCCAVPQPPH
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacgttgacattcgacactgacctt
gctgtccagaccgtgctggagctcaaacatgccatccaagccaaatacaagattgcaatc
cagcaccaggtcctggtggtcaatggaggcgagtgcatggtggtggagaggcgcgtgtgc
agctacagcgccggcaccgaaaccaaccccatattcctgttcaacaaagagatgatcctg
agcgaccgcgaccccaccatccccaaaaccaccttctccatcgagagtgagatccaggtc
aaggtggaggagtccctcctgatgccagccgtctttcacaccgttgcctcgcgaacacag
ctcgctctggaaatgtttgaagttgccaacaaactcagctccttctgcgaacgcctggtg
cacgacgaacacctccagcaccagggctgggcggccatcatggccaacctggaggactgc
accatctcctatcagaagctgctcctcaagtttgaaacctcctatttgaattaccaacag
gacctggaagaaatcaagacaaagctttcaaagtccgtgtgtgtgggcgcgcgtgcgagg
ttggggatggcggtgtccgtcatggcccggatccctctgctggaatgtctgacgcagcag
agttaccgagagagcatggagaagtccagctccacccccgagaaggattcggacgagacg
gaggaggaggagaaatccaccgattcggtgctgcgctcctccaagacgccgagcggcgaa
ccggaggcgagcgagatggccgacagcggcgggctgagggccatcctggacgaggccgcc
aacccgtcctgcttcaacgtcacgctgctggactggatcaacgtgcaggacagacccaac
gacgtggagtcggtggtccggaagtgcttcgactccatcaaccgggtgagtgggagccgc
cagggcgcggtggagctgctgcagagaggtcctgacctggcgtcctccttgcagctggac
ccccgcatcattcagcccttcctggctgactgccgcgacaccatcgccaagctggataat
cagaacatgaaatccatcaaggggctggaggacaggctctacgccctggaccagatgatc
gccagctgcaagaagctggtgaacgagcagaaagaacttgctcagggatttttggccaat
cagaagcgagctgagaacctgaaggacacgtccgttttgcccgacttgtgtctgagtcac
accaaccagctcatgatcatgctgaacaaccacaggaagctgctggatatcaagaagaag
tgcaccaccgccaagcaggagctggcaaacaacctccaagtccgactcaaatggtgctgc
tacgtgatgctccacgccgaccaggacggcgagaaggtccaggctctgctcaggctcctg
acggagctgatggagagggtgagggcggtggaggctctcagcaacgtgccccagatgtac
tgcctggccgtggtggaggttgtcaggaggaagatgttcatgcgccactacagagaggtc
agagcctggtcccggtccccccccccccccccccgcttctccgcctcactgccacggctg
tggtggcacatctgtctgtcctctccttctcagtgggcgtattcgctggtgaaggacgga
aaactgctctacgatgcggagaagctgaagagggaatcgtttggaaaactctttaggaaa
tctttcctccgaaaccggctgttcagaggactcgattcatggccgcccaagtctttttgt
acgcagaagcccaggaggttcgacgacgaactccctgacatctccgtcgaggacctgcag
tacttgaaatcatgctgccctgcggaggttcagcctttcctaatggttcctgccttgtgt
gactttgaacccttgaatcgccacgtcgacgccctgcaccatctggtccaagctgctcag
agtgtggacgagatgtctcagaccatcactgacctgttgagcgaacaaagggagtcctac
agtaggagctctcacagatcaaccgccttgacgccgcagtcggagagcggacctgggacg
gcgacatccgcgtcctccaaaacgcctccctcgcttagccttcagggaaccagctgccag
gcccttcacgttcctgtcccggctcctcttgaggacctctccccagacagcatagatgcc
cagacctttgactttgaaaccatcggccacccaaacatggacccagtgttgcagcagggc
tccctcgatctggattctctagcagagagtccggagtccgacttcatgtctgccgtcaac
gagtttgtgatcgaggagaacctgacctctcccaaccccatcagtgtccccaccagccct
gaaatgatggtggagtccctatactcatcagtgatcaacgctattgacaacaagcgcatg
caggacaccacaacgctggagagggagaacgccagggtggctgccctccgacgggtcatc
gaccggtaccagtcagctgcggaggagacccaggccggtgttcggagcgtgagggatgac
ctctgccacctgagaactgttgtgctaaaggaacaacaggactttgctttggtcatgagg
agcgtgagctccgaggtgcgcggcgtctgccaggcccgccagtcgcagctccgagagcgc
catcagaatgagctcctgtccctgcggcaggagctccaaaagcaggtccagacactaacg
gaggaaaaccaagtcaaccagaacatcgtccgggacgtccagcgtgccatgctggagctg
gaagggctcctggagcgcaaagagaaggaactggtgcagctgcagagcgagaaggatcag
ctggccgtgctggagagccagcagagggatctggtcctaaacctgcagcaggtgaccagc
agccaggcggaggagatcaggacgctctcggcctccaggggctccctggccgaccagctg
aaggatctgcgctctgagatcgaacgcagtcagaaagagatccgggagaagctggaggtt
gacaagcagacccagttgaaagagctggaggaccagttgaaacggcaacaccaggcggag
ctggagcgcctgggtgagcgcaaccgcaaggccctggaagacctggctgctgaaagtggc
gcaaagctgtgcgagactcttgatcaacacgccagcgtgctgagagagaaggaccggcag
atcaaagactcggagtgtcgcggcgccgagctggccgagctccgctgcaaactggaggtg
gagctggccctgaaggagtcggagacggaggagttgaggcggtcgttcgaggatgccaag
gcgcagcaggccgaggccgtgaggtcccgggtggagtcggagaccagagacctgagcgac
gagctggcctgcgtcaaaaaacagctgcaggccaaaaacgaggagtacgaagtggacctg
tcggaactgaggaccctcatgaggatcgagaaggaccactgcatctccgagctggtggac
aggtacgacgaggaggccgccgcgctgcgcggcgagagcacctgcctccgcgagcgactg
gaggacgccacgaggaaccacgccgagcagtggcagaagctccggcaggaggccgagcag
gagaaaggaaagcagcggagcagtttccaggaactggagcaggagctgaggactgttatc
agcaatttgcaggcagaaaacggcctgttgtccaaaaaactggacagacacgcgcgtgaa
aaagactcgggggaggtcctgtcatcagatgccctcaaggacctacagcagcagaaggac
gacacggagaagaagctattggaaaagattcgacaactggagaaggaacttcaggggagg
cagtcctcaaaaagcgccgacgccgcagccccccggtccctggactcagccatacaggag
cacctgcagcaggaacgggcttcgctgcagtctcagatggagctcctggagaagcaaaag
aacgaagagatccagaacctcaaaacctctctcatcgctgaacagcagactaatttcaac
accgttctcacccgggagaagctgaagaaagagcaggtcatcagcgaactgacggagaag
ctgcgaaaagttacccagcagcaggagaaggacaaagccctgatcgagacgctgtccgag
gaccgagccagcgtcatgcaggagaagaagcatctggaggaggagctgaaccgcctccgc
ggcgccacgctggtctcttccgccttcttcgccaccaacccctcagggcaggagcttccg
cacgccaaagcggaagcgggagcccgagccttgcccgggggcggggcctgtccctccgag
cccgaaaccgacaggctggcctccgtcgcagccatccgggaagacgaaggggtggactcg
gcggtggaggccagcatggtcactgtccatgagaacatcctgatgtcagaggagaaacag
cgcatcctcctactggagaggactttacacatgaaagaggaggagaacaaacgcctcagc
cagagattggtgagttcctgctgtgctgttccacagccgccccactag
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integrated database retrieval system
