Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016684G001
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Entry
GSTEN00016684G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09299
zinc finger homeobox protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00016684G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
GSTEN00016684G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_15
zf-met
zf-C2H2_jaz
zf-C2H2_16
Homeodomain
zf-C2H2_6
PTS_EIIC_2
Zn_SUZ12
Motif
Other DBs
NCBI-ProteinID:
CAF98829
UniProt:
Q4SKK3
LinkDB
All DBs
Position
undetermined
AA seq
1027 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYSNVVDAGSDSDDEDKLHIVEEDGGGGGGVADGTECDS
MLPEEEHGGGYRWDGVWHTYARHQWRMLMDNYPFGFTVKDDGLSDGDDDASTDALVEEML
QQGDTAVIYPEAPEDEPQRLGTPDTGIHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHI
KYRHEKTDESFSCPDCNYSFAYRAQLERHMAVHKSGRDQRHVTQSGGNRKFKCNECGKAF
KYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCISVVSVNGRTRLGSGKA
QAQGPSPALSTSPSLLRTQIREKLEHSKPLQEQLPLNQIKTEPLDHEYKPTVLAPPAVTA
MSAGIFNGGAAAPLQGTVQAVVLPTVGLVSPISINLADLQNALKVAVDGSVIRQALEGSG
VKGQGQLNAGLTTGMLHAPHQQLISAISLPIVGQDGNAKLIINCSLDPSQAQLAAQNLKK
EPEGESLKTTDAYKSQKLPEDLTVRGSRASQTPDREEKTTKTCILCDSCPGGLEALHALK
NCKADGLRLNGAGLDTSESAVAALLSEGGLCTQPKNILALLKAYSALNADPTKEELAKIS
DSVSLPIHVVKRWFDKMQEGPVSLGAPTPPSEEEDLCEANSVVALVPGKNVANMSPSVTQ
DSPTEATPAEVQTSTHGSLGPPGPPLNLASGSTDGPLDLSLPKQAREDAEAGVARVCPAL
FSGPASGDEPLNLTCIKKEAFPLSSAGPLALYASQPGAKALDVAATMRCLRALATNNKQT
ILIPQLAYTYTTAANSPAGTETQETVHLNGVKEERLDSEGMSTMEEQNDSDSGPQRKKMK
KSDNGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECNICSKAFKHKHHLIEHMRLHSGE
KPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQSQAGGPESPEEAALQGEPLTSAQVDS
DERGSSTREDEESEEEEEEEEEEGAVDMDDIQVVQIGEEGGDEEEDRMMAEGGGEEEEEA
DTRQEEV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccaacgtg
acgaactacagtaatgtggtggacgccggctcggactcggacgacgaggacaagctgcac
attgtggaggaggacggcggtggcggcggcggtgtggcagacggcacagaatgtgacagc
atgctgcccgaagaggagcacggcggggggtaccgctgggacggcgtgtggcacacgtac
gctaggcatcagtggaggatgctaatggataattacccttttggcttcacagtgaaggat
gacggcctgtcagacggcgacgatgacgctagcacagatgctctggtggaggagatgctc
cagcaaggagacacggctgtcatttatccggaggccccagaggacgagcctcagcgctta
ggcacaccggacaccggcatccatgatgagaacggaactcctgactccttctcccagctg
ctcacctgtccgtactgcgcccgtgggtacaagcgctacagctcgctgaaggagcacatc
aagtaccgccacgagaagaccgacgagagcttcagctgccccgactgcaactacagcttc
gcctaccgcgcccagctggagcgccacatggcggtccacaagagcgggcgggaccagaga
cacgtcacacagtcgggaggcaatcgcaaattcaaatgcaacgaatgcggcaaagccttc
aaatacaagcaccatctgaaggagcacctacgcatccacagtggagagaaaccgtacgag
tgctccaactgcaagaagcgcttctcccactcgggctcgtacagctcccacatcagcagc
aagaagtgcatcagcgtggtctcggtgaacggcaggacgcgcctgggcagcggcaaagcc
caggcgcaggggccgtcccccgcgctgtccacctcgccttcgctccttcggacccagatc
agagagaagttggagcacagcaagccgctgcaggagcagctgcccctcaaccagattaag
actgagcccctggaccacgagtacaagcccaccgtgctggcgccgccggccgtcacggcc
atgagcgccggcattttcaacgggggcgccgccgcgccgctgcaggggacggtgcaggcc
gtggtgctgcccaccgtaggacttgtgtcgcccattagcatcaacctggcggacctacag
aatgccctcaaagtggcggtggatggtagcgtcattcgccaggcgctagaagggtcgggg
gtcaagggtcagggccagcttaatgcgggattaaccactggaatgctccacgcgccacat
cagcagctcatctcagccatcagtctgcccatcgtgggccaggacggaaatgcaaaactg
attattaactgcagcctagaccccagtcaggctcagctggcggctcagaacctgaagaag
gagccggagggggagtcgctaaagaccacagacgcgtacaagtcccagaaactcccggaa
gacctcactgtcagaggttccagggccagccagaccccggacagggaggaaaagaccact
aaaacctgcatcctgtgtgacagctgccccggtggcttggaggcgcttcacgccctcaaa
aactgcaaagcagacggtctcaggttgaacggggccggcctggacacgtccgagtctgct
gtcgccgccctgctgtcggagggggggctctgcacccagcccaaaaacatcctggccctc
ctcaaggcctactccgccttaaatgcggaccccaccaaggaggagctggccaagatctcc
gactcggtcagcctgccaatccacgtggtcaagaggtggttcgacaagatgcaggagggc
ccggtgtcgctgggggctccgacgcccccctccgaggaggaggacctgtgtgaagccaac
agcgttgttgctctggttccaggaaagaacgtggccaacatgagtccctccgtcactcag
gacagccccaccgaagccactccagccgaggtccagacgagcacccacggctccctggga
ccgccgggaccgccactgaacctagcatccggtagcactgacggcccactggacctgtcg
ctgcccaagcaagccagagaggacgccgaggcgggcgtggctagggtctgccccgccctc
ttctctggtcccgccagtggggacgaacccctgaacttaacttgcataaagaaagaagcg
tttccactctcctccgccggccccctggccctgtacgccagccagccaggggccaaagcc
ctggatgtggcggccaccatgcggtgcctgagggcgctagccaccaacaacaaacagacc
atcctgatcccccagctggcctacacctacaccaccgcggccaacagccccgcaggaacc
gagacccaggagaccgtccacctcaacggagtcaaggaggaaaggctggactccgagggt
atgtccaccatggaggagcagaatgactcagactcgggccctcagaggaagaagatgaag
aagagcgacaacggcatgtacgcctgtgacctgtgcgacaagatcttccagaagagcagc
tcgctgctgcggcacaaatacgaacacacagggaaacgaccgcacgagtgcaacatctgc
agcaaagccttcaaacacaagcaccacctgatcgagcacatgcgcctccactccggggag
aagccctaccagtgcgacaagtgcggcaaacgcttctcccactcgggctcctactcccag
cacatgaaccaccgctactcctactgcaagaaggaggcgcagagccaggcgggaggcccc
gagagccccgaggaggcggcgctgcagggggagccgctgacctccgcccaggtggactcg
gatgagcgcggcagcagcaccagagaggatgaggaaagtgaggaggaggaggaggaggag
gaggaggaaggagcagtggacatggatgatatccaggtggtgcagataggtgaggaagga
ggggatgaggaagaggatagaatgatggctgagggcgggggggaggaggaagaggaggcc
gacacgcggcaggaggaggtg
DBGET
integrated database retrieval system
