Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016787G001
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Entry
GSTEN00016787G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14309
nuclear pore complex protein Nup93
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00016787G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00016787G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00016787G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-ProteinID:
CAF98902
UniProt:
Q4SKD0
LinkDB
All DBs
Position
13
AA seq
905 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDLTQDLEPSFVSAVTTPGRSSLDS
VEVAYGRQIYIFNEKIVNGHIQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DALKSRTSVEMQMAFVRQALSCLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
TPDRRLSPNSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDISDNHGEIADKTEDYLWLK
LNQVCFDDDGSTSPQDRMTLPQLQKQLLEDYGESHFLASQQPFLYFQVLFLTAQFEAALA
FLFRVERLRSHAVHVALVLYELRLLLTSSGQSAQLLSQEPGDPPMIRRLNFIRLLMLYTR
KFESTDPREALQYFYFLRNEKDSQGENMFLRCVSELVIESREFDMLLGRLEKDGSRKVGS
CFICCCFIHLILLLFLCFMSIQHHPCADTCTCPLLCFSLSSPPLQPGVIDKFAGDTRAII
SKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSNKERLKNTAVA
IAERYRCQGISAEKSMDSTFYLLLDLMTFFDEYHAGHVDRAYDVSAAAGGGKSPKKGRAR
HSSPSLPLSLSLSPCVFQVMERLKLLPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMN
ILFTQHKRLKGAPAGTPGRSQRSAEDKDAQLRSQARALITFAGMIPYNMAGDTNARLVQM
ELLMN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgagggtttcggggagctgcttcagcaggcagaacagctggcagctgagaca
gaagccgtgtcagaactgccacacgtggagaggaacctgcaggagatccagcaggcaggg
gagaggctgcgatcccggactctaacgcgcacctcacaagatgcagccgacgtcaaagcg
tcgattctactcggttctcgcggtttagacatctttcacatttcccagaggttggaaagt
ctgagtgccgccactacgttcgaaccactggagccagtgaaagacactgatattcaaggc
tttttgaagaacgagagggacaacgccctcctgtccgccatcgaggagtctcgccgcagg
accttcctcctggctgaggagtatcaccgtgagtccatgctggtccagtgggagcaggtg
aagcagagggtgctgcacacgcttctcggagccggagaggacgctttggacctaactcaa
gatttagagcccagctttgtgagtgcggttacaactcccgggagaagttctctggacagc
gtggaggtggcctatggacgccagatttacattttcaacgagaaaatcgtaaatgggcac
attcagcccaatctaggagacctttgcgcttcggtagcagaaagccttgacgacaagaat
gtgtcagacatgtggctgatggtgaagcagatgacagacgtgttgctggttccagccaaa
gacgcgctcaaaagtcgcacctctgtcgagatgcaaatggcctttgttcgccaagccctc
agctgcctggagaacagttataaaaactacaccatggtcaccgtctttgggaacctccat
caggcccaactaggaggcgtacccgggacataccaactcgtccggagtttcctcaacatt
aagctcccgggaccgctgcccggcatgcaggacggcgagatcgagggccacccggtctgg
gcggtgatctactactgcctgcgctgtggagatctgaacgcagccatgcaggttgtaaac
cgggtgcagcatcagcttggagactttaagacctggtttcaggagtacatgaacagtccc
accccggacagacgactttctcctaactccgaaaacaaacttcgtcttcactaccggcgc
gtgctgaggaacagcgctgacccctacaagagggccgtctactgcctgatcggcaaatgt
gacatcagcgataatcacggggaaatagcggacaagacggaggactacctctggctgaag
ttgaaccaggtgtgtttcgatgatgacggcagcacttctcctcaggacaggatgacgctg
ccacagctgcagaaacagctgctggaggactatggagagtcccatttcctggccagccag
cagcccttcctgtatttccaggttttgttcctgacggctcagttcgaggcggcgctggcc
ttcctgtttcgcgtggagcgtcttcggagccacgccgtgcacgtggccctggtcctgtac
gagctgcggctgctgctgacgtcgtccggccaaagcgcacagctgttgagccaggagccc
ggggacccgcccatgattcgccgcctcaatttcatccgcctgctcatgttgtacactcgc
aagttcgagtccacagatccacgcgaagccctacaatacttctacttcctgcgcaacgag
aaagacagccagggtgaaaacatgttcctgcgctgtgtcagcgaactcgtcatcgagagc
cgagagttcgacatgctgctggggagattggagaaggacggcagcaggaaggtaggatcc
tgttttatctgctgttgtttcatccacctgatcctgctcctgtttttatgttttatgagt
attcagcaccatccttgtgcggacacgtgcacctgccctctgctctgtttctcactgtcg
tctcctccccttcagcccggagtcatcgataaatttgccggcgacaccagagctataatc
agtaaagtggccctagaagctgagaacaaaggcttgtttgaagaggccgtcagactctac
gagcttgcgaagaacccagataaggtgttggagctgatgaacaggctgctgagtccggtc
atcgcacaggtcagcgccccccagtccaacaaggagaggctgaagaacaccgccgtggct
atagcagagcggtaccgctgccagggaatctccgccgagaagtccatggacagcaccttc
tacctgctcctggacctgatgaccttcttcgacgagtaccacgccggccacgtggacaga
gcctacgacgtgagcgcagccgcgggcggagggaagagtcccaaaaaaggccgagcacgc
cacagctctccctctctccctctctctctctctctctctccctgcgtctttcaggtgatg
gagcgtttgaagcttctcccgctcagccaggacagcgtagaggagagagtcgccgccttc
aggaacttcagcgacgaggtccggcacaacctgtccgaggtgctcctggccaccatgaac
atcctcttcacgcagcacaagcggctgaagggggcgccggcgggcacgccgggacggtcg
cagaggagcgccgaggacaaggacgcgcagctccgaagtcaggccagagccctgatcacc
ttcgccggtatgattccctacaacatggccggagacaccaacgccaggctggtgcagatg
gaattactgatgaac
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