Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016829G001
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Entry
GSTEN00016829G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03020
RNA polymerase
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSTEN00016829G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00016829G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00016829G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00016829G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GSTEN00016829G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GSTEN00016829G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
CAF98942
UniProt:
Q4SK90
LinkDB
All DBs
Position
13
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWIQIDANSSVLH
DEFVAHRVGLIPLTSDDIVDKLQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILVVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNVLRHTVYPRPEEWPKSEYSEIEEDEIQAPFDPNGKPEKFFYNVESCGSLR
PENIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacagtaaaaattacggaattaacagacgaaaatgtcaag
tttgtaattgaaaacaccgatttggcggttgcaaactctatcagacgtgtctttatgtca
gaagttcccacaatagccattgactggatccagattgatgcaaattcatcagtactgcac
gatgaatttgttgcacatagagttggtctcatacccctcacaagtgatgacattgtggac
aaactgcaatactcaagggactgtacctgcgatgacttttgtcccgagtgctccgttgag
ttgacactggacgttcgatgcactgaggaccagacacgccatgtcacgtcacgtgatctt
ctgtccaacaaccccagagtgatcccagtgacgtccagaagtcgggataatgatcccaac
gactatgttgaacaagatgatattttggtcgtgaaactccgtaagggtcaggaattgcgg
cttagggcatacgctaagaaaggttttgggaaggaacacgccaagtggaacccaacagcc
ggggtgtcctttgagtacgacccagacaatgttctgaggcacacagtgtacccacgacct
gaggagtggccaaaaagtgagtactcggagattgaagaggatgagattcaggcccctttt
gatcccaatggaaagccagaaaaattcttttataatgtggaatcatgcggctccctacga
ccagagaacatcgtcatgtcggcgctggccgtcctcaagaaaaagctgagtgacctgcag
actcaactgagccacgagatccagagcgatgtgctcaccatcaac
DBGET
integrated database retrieval system
