Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016870G001
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Entry
GSTEN00016870G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06823
collagen type XVIII alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00016870G001
00535 Proteoglycans [BR:
tng00535
]
GSTEN00016870G001
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00016870G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GSTEN00016870G001
Proteoglycans [BR:
tng00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
GSTEN00016870G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00016870G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Laminin_G_3
Motif
Other DBs
NCBI-ProteinID:
CAF98974
UniProt:
Q4SK58
LinkDB
All DBs
Position
2
AA seq
1333 aa
AA seq
DB search
VSLLQLIGDPPPPEITQVDGPDNSPAYVFGTDANTGQLARAHLPNPFYRDFALIFHLKSS
SNKGGVVFSITDASQRIMYVGVKLSDVQGGKQNVILFYTEPDSEQSYEAARFPVPSTVDT
WTRFAIAVRDETVMFYLNCEAGPQVMRIERSPDDMELEAGAGVFIGQAGGADPGKFLGVI
GELRVVGDPRAAERYCEEDGDDSDMVSGYFGHTSKHPRSESNQAVTGTSGSALLPRFQTL
MVLIDGMEVQCVCQACGTIGAKGEKGDQGQRGEKGDRGPVGPKGDSGFGSSFRGGVRGEK
GTAGFGQKGEPGPPGPPGPSGPPGPAHNSVGCKGGSAGNTCLQGPPGIDGEPGDPGEDGK
PGPVGPPGFPGTPGDQGPKGEKGDTGEGPPGPRGPPGPPGPPGPGSRSTFVDMEGSGFPD
LESLRGPPGLPGLPGPPGPPGPATAVTGLGSGATGSPGKDGAPGQPGLPGIPGTDGLPGP
TGPRGEKVNSELGLPGAVGQKGEQGSPGLPGNPGEAGLAGLPGPRGPMGLPGPPGPPGPG
FRVGFDDMEGSGGGFHQQPGVRGPEGKQGPPGFPGLPGKPGFPGPPGPKGNTGPGGKDGQ
PGLDGFPGPQGPKGFQGDKGDRGEAGQDGIGLPGPPGPPGPPGEIIYRSSGNVSHKETWK
WNFSIQTSQIEVDGAIGSVGPQGLPGQPGFPGPAGPKGDAGEPGLPGLAVKGEKGEPGLV
VGPDGSQLSLEGLTGLKGERGLPGPVGPPGSFGPPGFKGEIGMPGRPGRPGINGYKGEKG
EPGTGSGFGYPGPPGPPGPPGPPGPSIPLDRFNVSTQNAPLDLNNKDNNYFPAVKGIKGE
KGERGDQGLPGIPASNFDIYAFKNELKGEHGDQGLKGEKGEPGGYYDPRFGAVQGPPGNP
GLPGPKGDSIIGPIGPQGPPGQPGIGYDGPAGPPGPPGPPGAPGTGTYNYPVTVTGPPGP
PGPPGIPGESSGVTVLRSYDTMIATARHQPEGSLIYIVDKGDLYLRVRYGLRQVMLGNYS
PFFRDLVSSTHRKIMDFAFYNRFTHLYLLKENEVAEAQPPPVILYPHSQEQSHNNGAGHY
SQGEPVIQPIEPPPQPPVNGNNNNYPTRHEPRLPETRHTGHADGQSGTQSENRHTVTPHR
PPNPPVLQPLGNVETSATALHLIALNAPQTGNMRGIRGADFLCFQQARAIGLKGTFRAFL
SSKLQDLYTIVRRSDRDNFPIVNLKDQVLFRSWESMFGDDASKIMENVPIYSFDGRDILR
DSAWPEKMVWHGSSNKGHRQTDQYCETWRAGDRAVTGLASSLKSGYLLQQSASSCSGSYI
VLCIENAFTSHSK
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gtctccctgctgcagctgattggggatcctcctccacctgagataacccaggtcgatggg
cccgacaacagccctgcgtatgtctttggcactgatgccaacacgggacagttggcccgc
gcgcacctccctaatccattctaccgggactttgccctcatcttccacttgaagtccagt
tctaataagggtggagttgtcttctccatcacagacgcctcgcagcggatcatgtacgtc
ggtgtcaaactctcagacgtgcagggcggcaagcagaacgtcatcctgttttacacggaa
ccagactcggagcagtcgtacgaggcagccaggttccccgtgccgtccacggtggatacc
tggactcgcttcgccattgccgtgagggatgagacggtaatgttctacctcaactgtgaa
gcgggcccccaggtgatgcgcatcgagaggtcccctgatgacatggagctggaagctgga
gccggggtcttcatcgggcaggctggtggggcagatcctggaaagttcctgggggtaatt
ggtgagctcagggtggttggagaccctcgtgctgctgagaggtactgcgaagaagacggc
gatgactcggatatggtgagtggctactttggccatacttccaaacatcccagatctgag
tccaatcaggcagtcacggggacatcggggagtgctttacttcccagattccaaactcta
atggtcctgattgatggcatggaggtacagtgtgtctgtcaagcctgtggaaccattgga
gccaaaggagaaaagggtgaccaaggacagagaggagagaaaggagacagaggccctgtt
ggacccaagggagattctggctttggttccagcttcaggggtggagtccgtggagaaaag
ggcactgcaggctttggccaaaaaggagagccaggccctcctggaccacctgggccctcg
ggccctccaggacctgcacacaattctgtaggctgcaaaggtggatcagctggaaacacc
tgtctccagggaccaccaggcatcgatggagagccaggtgaccctggcgaggacggaaaa
cctggtcctgtaggacctccaggatttccaggaaccccgggtgaccaaggacctaaagga
gagaagggagacactggggagggacccccaggccctagaggacccccaggacctccagga
cccccaggaccaggatcaagatctacattcgtggatatggagggttcgggatttccagat
ttggaatctctgcggggaccacctggtctccctggtctaccagggccaccgggtcctcct
ggtcctgctacagcagtcacaggtttaggttctggagcaactggctcacctggaaaagat
ggggcacctggtcagcctggtttgcccgggataccaggaaccgatggcttaccaggacca
acaggtcccagaggagaaaaggtaaatagtgaactggggcttccgggagcggtcggacag
aagggagagcaaggaagtcctggattaccaggaaatccaggagaggctggactggcaggt
ctccctggacctcggggacccatggggctacctggaccacccggacctcctgggccaggc
tttcgtgtgggatttgacgacatggagggatctgggggaggttttcatcagcaacctggt
gtcagagggccggaaggaaaacagggtcctcctggctttcctggacttccaggaaaacct
ggtttccctggtccacctggcccaaagggtaacacgggtcctgggggaaaagatggacag
ccaggcttggatggcttccctggacctcagggaccaaagggttttcagggtgacaaagga
gacaggggtgaagcgggtcaagatggcattggactgccaggcccacctggccctcctgga
cccccaggagaaatcatctaccgatcatctggcaatgtgagtcataaagaaacatggaag
tggaatttcagcattcaaacctcacagatagaagttgatggggccattggcagtgttggg
cctcagggattacctggtcaacctggattccctggcccagcaggaccaaaaggtgacgca
ggagagcccggcctaccaggcttagcagtgaagggtgagaaaggtgagccaggcttagtg
gtcggacccgatggaagtcaactgtctctagaggggctaacaggtctgaagggagagagg
ggactaccgggaccagtcggaccacctggctcatttggccctcctgggtttaaaggtgaa
attggaatgccaggcagacctgggcgccctggtataaatggatacaagggtgaaaaggga
gagcctggaactggttctggatttggctatccaggaccaccaggcccacccggaccacca
ggtcctcctggaccatccattcccttagatcgtttcaatgtgagtacacaaaatgctcca
cttgacctaaacaataaggataataattactttcctgcagtaaaaggcattaaaggggag
aaaggagagcgaggtgatcaaggccttccaggaatccctgcctctaattttgatatctac
gcgtttaagaatgaactaaagggggagcatggagatcaaggtctaaaaggagaaaagggt
gagcctgggggatattatgacccacgttttggtgccgtgcaaggacctcctggcaatcca
ggcctgccaggccctaaaggggactcaataattggtcctattggaccccaggggccacca
ggacaaccagggattggttatgatggacctgcaggtcctccaggacctcctggaccacct
ggagctcctggaactggcacatacaattatcctgttactgtgactgggccacctggtcct
cctggtccgcctggaattccaggtgaatcctccggggttacagttttgaggtcgtatgac
accatgattgctactgccagacaccagccagaaggaagcctgatctacatcgtagacaaa
ggagatctgtacttgagagtacgctatggactacgtcaagtcatgcttggaaactacagt
cccttctttagagatctggtaagttccacacataggaaaataatggattttgccttttac
aatcgattcactcatttatatcttctgaaggagaatgaagtggcagaggcccagcctcca
cctgtcatcctgtatccccattcccaagagcagtcgcacaacaacggcgctggccattac
tcccagggtgaacctgtgatacaacccattgagcctccgccacagccgcctgtcaacggc
aacaacaacaactaccctactcggcatgagcccagactccctgaaacaagacacaccggc
catgcagatggacaatcgggtactcagtcagagaaccgacatactgtgactccacaccga
ccacccaacccgccagtactgcagcctcttggcaatgttgaaacatcagcaacagcacta
catcttatcgccttaaatgccccacaaactggtaacatgcgaggaatccgcggggcagat
ttcctgtgcttccagcaagctcgagccatcggactcaagggcaccttcagagcattcttg
tcctccaagcttcaagatctctacacaatcgtccgaaggtcagatagggacaacttcccc
attgtgaacctcaaggaccaagtgttgtttagaagctgggaatctatgtttggtgatgac
gcaagcaaaataatggagaatgtaccaatctactccttcgatggcagagatattctcagg
gatagtgcatggccagagaaaatggtctggcatggatcgagcaacaaaggccaccggcaa
acagaccagtactgtgaaacatggcgagcgggagatcgagctgtgactggtctggcatcg
tcactgaagagcggctacctcctgcagcagtctgccagcagctgttctggatcatacatt
gttctctgcattgagaacgccttcacgtcacactccaaa
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