Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016951G001
Help
Entry
GSTEN00016951G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00016951G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00016951G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSTEN00016951G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Utp12
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_VPS8
EIF3I
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_Nup120_160
Paf1
Beta-prop_NUP159_NUP214
WD40_2
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
PAN2_N
Motif
Other DBs
NCBI-ProteinID:
CAF99021
UniProt:
Q4SK11
LinkDB
All DBs
Position
10
AA seq
651 aa
AA seq
DB search
MAADGGISSVQLPCVFSPKTRQYLALCAQDGKLRIWNTDSKTLHQEYVPSAHLSATCICI
SWGPCRTLKERPQRKKRKSEAGQVEESADLLAMGTAAGTVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPDDSLLYSGSDDTNIVEWDLQTGKTKSKWKADRAAVTSLCVSPDGKLLLSAG
QTIKMWDLNTKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFALTDEPQHIDLIPSKSREEVMRLAVVCKDGQLHLFEHFLNGPCKKPLTPS
CTVQMSDTKDTPMPIPLLAAALRADTPTLTLAYGNHLQPVMEKVEINTAERRVCLTRDVQ
TSLSISMGTTLSKVKTPIVNANSKLLVPGLPGHQAPVKGATQGSEKRKTETKEQMTIAER
IGEIDLSSRKGALKATASLQADNFAVLLVQGLESNDAHILNKVLQTNKETVIKKTVAQLP
LPAVLPLLKELTKRLQGHPFTAVLMTRWLKAVLVHHTSYLASLPDLVTQLGLLYYTIESR
VKMFHKLTKLHGKLYLLISQVEHERKPTATTVEREAKLVYEEESSDEDEASGDEGLPDDD
SDNWEEEEAMEEDQDEQTDREKDDAEDPESRPDSKANGEDDMEHENESEEE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatggtggtatttcgtcggtacagctaccttgcgttttttcacccaaaaca
cgacagtacttagctttgtgtgcccaagacggaaaacttcgtatatggaatacagacagt
aaaacacttcaccaagaatacgtgccttcagcccatttgagtgccacttgtatctgcata
tcctggggaccatgccggacactcaaggagagacctcagaggaagaagaggaaatccgag
gcgggacaggtggaggagagtgcagacctgttggccatgggcacagcagccggtaccgtg
ctcatttatagtacagcaaagggagcgctgcactgtacgctggatggaggccacagcgga
ggggtgaattgtgtccagtggcacccagatgacagtttattgtacagcggttcagatgat
acgaacattgtggaatgggacctgcagacaggcaagacaaaaagcaagtggaaggccgat
cgtgcggctgtgaccagcctttgtgtgagccccgacgggaagctgctgctgtcggcaggt
cagacaatcaagatgtgggatttgaacaccaaggaggtctatagaaaattcacgggccac
tccaccgctgtgacgaccctgtgcttcgccaccacgcgacctcctgacagcaacggcctc
tattttctctccggggcagcacacgatcgactgctcagtgtttggcaagtgcgagaggat
ggaaaggacaagaactcggtggtgtcatttgctctgactgatgagccgcaacacatcgac
ctcatcccatccaagagcagggaggaggtgatgaggctggcggtggtgtgcaaggatggc
cagctgcatctctttgagcactttttaaatggtccctgcaagaaaccgttgacgccttcg
tgtacggtgcagatgtctgacacaaaagacaccccgatgccaatcccgctgctggcagct
gccctgcgagcagatacgccgaccctgacgttggcctatgggaaccacttgcagcccgtc
atggagaaagtggagatcaacacagccgagaggcgtgtgtgtttgacacgggatgttcag
accagcttgtctatatccatgggaaccacattgtccaaggtgaagacgccgattgtcaac
gccaacagcaaattgttggtgcccgggcttcccgggcaccaagctccagtcaagggagcc
acacaggggtcagagaaaaggaaaaccgaaaccaaagagcagatgacgatagcagagcga
attggagaaatagatctctccagcagaaagggagctctgaaagcaacagcctccctgcag
gcagataattttgccgtgctgctcgtgcaaggcctggagagcaacgacgcccacatccta
aacaaagttcttcagactaataaagagaccgttataaagaagacggttgctcagctaccc
ctccctgctgtgctacctttgttgaaagagcttacaaaaaggcttcaaggacaccctttt
acggctgttttaatgacccggtggctcaaggctgtgctcgtgcaccacacatcatacctg
gcatcgctgccagacttggtcacccagctgggcttgctttattacaccatcgagagcaga
gtgaagatgttccacaagttaacgaaactacacgggaaactgtacctcctaatatcacag
gttgaacatgagcgaaagcccacagcgacgacggtcgagcgcgaggctaagctggtgtat
gaagaggagtcatccgacgaagacgaggcctctggcgacgaaggtctgcccgatgacgat
tctgacaactgggaagaggaggaagcgatggaggaagaccaggacgagcaaacagaccga
gagaaggatgacgccgaggatcccgaaagtcggccggattccaaagctaacggggaggat
gacatggagcatgaaaatgagagcgaagaggaatga
DBGET
integrated database retrieval system
