Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017044G001
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Entry
GSTEN00017044G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00017044G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00017044G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00017044G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-ProteinID:
CAF99087
UniProt:
Q4SJU5
LinkDB
All DBs
Position
1
AA seq
687 aa
AA seq
DB search
MEGSDSSDQSGGDRPESLRRRQQDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGNKS
LFTTWKNNNLEGTLGLNVTPICQGVLSVGLYPNRECCHVVALSSSLLWSKCSSMWMTEDT
QSISVPGQWEGECKFGASFSGAPCKERALEGEWHALKVRLQRSGEATADELLSRLQQVKE
GQEQQNPAPSNDRGEEPFEPPESAEDSASLLDWLNTVRQPGNTTRTGHRGNQSWRAVSHT
NPNSGDFHFSLEISVNRDLAEQQAAAEGQQDPPERTPEAAPELPPEVKIWWGLRRPCSLS
PERRRTRARTARSRSPLNLDQLDGLSNYSSPGQTPAANAAPPPQVEGSSRSGHDVPRQSA
GDGGSSCRPEALIGRPPPEVPNASSQEGEVAAGEGGASGRRPPTIMLDLQVRRVRPGEYR
QRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYISTIRIPIRRISDASL
GEATSMALQSMIRQIMTGFGELGYLMDSDSDSLDSTRGANPSADPGEALGNAPAAPAADV
DEEPLAAAGDGARTAEAPVDEGLAAAAPPTYGSRARPRPPGGLEEPSSLPFLRLAHFFLL
NDDDDDQPQGLTKEQIDNLSMRSFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCI
DRWLSENSTCPICRRAVLVSANRESVV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcggacagttcggaccagagcggcggcgaccggccagagtcgctacgcagg
aggcagcaggaccgtttgggcagggaagaggccttctaccagtttgtcaacaatctcagt
gacgaagactatcggctcatgagagacaacaatctgttaggcactccaggtaataaatct
ttattcacaacgtggaaaaacaataacttggaaggaactctggggttaaatgtcacacca
atctgtcagggggttcttagtgtgggtttatatcctaacagagaatgctgtcatgtagtg
gctctctctagttctttactctggtcaaaatgcagcagcatgtggatgactgaagacacc
caatccatttctgtcccaggacagtgggaaggggaatgtaagtttggagcatcctttagt
ggagcaccctgcaaggagagggcattggagggagagtggcatgccctgaaggtccgcctg
cagaggagtggagaggcaacagcggatgagctccttagtagactccagcaggtcaaagaa
ggtcaggaacagcaaaaccctgctcccagcaacgaccggggagaagagcccttcgaacca
cctgaaagtgctgaggattcagccagtctcctggattggctgaacacggtcaggcagcca
ggcaacacaaccagaaccggccaccgcgggaaccaatcgtggcgggccgtaagccacacc
aaccccaacagcggcgatttccacttcagcctggagatcagcgtgaaccgtgacctggcc
gagcagcaggccgccgccgagggccagcaggacccgccagagcggacacccgaggcagcc
cctgagctgccccccgaagtcaagatatggtgggggttgaggagaccctgcagcctcagc
ccagagcggcgcaggaccagagcccgcaccgccagaagtcgctcccctttgaacctggac
cagttggacggtctctctaactatagctctcctggccaaaccccggcggctaacgcggcc
cccccgccccaggtggaaggcagttcccggagtgggcatgacgtccccaggcagagcgcc
ggggacggaggaagctcatgccgtccagaggcgctgatcggaaggcctcctcccgaagtc
ccaaatgcttcctctcaggaaggcgaagtggccgcgggggagggcggtgcgtccgggcgc
cggcctcccaccatcatgctggatctccaggtgcgccgcgtccgtccgggcgagtatcgc
cagagagacagcatcgccagtcgcacgcgctcgcgctcccagaactccaacaacactttt
ctgtacgagagcgagcggggcggattccgcaggactttctcgcgctccgagcgcgccggc
gtgaggacttacatcagcacaattcgcattcccattcgtagaatctccgacgccagtctg
ggcgaggccacgtccatggccctgcagtccatgatccgtcagatcatgactggctttggg
gaactcggctacctcatggactccgactccgactctttagactccacccgcggcgccaac
ccctcagccgaccccggcgaagcgctcggcaacgctcccgccgctcccgccgccgacgtg
gacgaggagccgctggcagcagcaggagacggcgcgaggacagccgaggctcctgtggac
gagggcctggctgctgctgctcctcccacctacggcagcagagctcgacccaggcccccc
ggcggcctggaggagcccagctcgctgcccttcctccggctcgcccacttcttcctcctg
aacgacgacgacgacgaccagccgcagggactcaccaaagagcagatagacaacctctcc
atgcgcagcttcggcgagagcgacgccttgaagacttgcagcgtgtgcataacagagtac
gcggaaggcaacaagctacggaaacttccgtgctctcacgagtaccacgtgcactgcatc
gaccgctggctgtctgaaaactccacctgccccatttgccgcagggctgtgctagtttcg
gcaaaccgggagagcgtggtttag
DBGET
integrated database retrieval system
