Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017076G001
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Entry
GSTEN00017076G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16498
protocadherin delta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
GSTEN00017076G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tng01009
]
GSTEN00017076G001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00017076G001
Protein phosphatases and associated proteins [BR:
tng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTEN00017076G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00017076G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
CAF99112
UniProt:
Q4SJS0
LinkDB
All DBs
Position
1
AA seq
734 aa
AA seq
DB search
SIRFSVPEEQEPGTLAGSLGKHFPPPYQLLTPEFLWMEKITGDFYTTERKLDREALCPEE
TEAERCIILLTAVVGPSGDLIQFPVIIEDVNDNEPYFEKSEIHLWVSEDATVGTSLLLDV
QAVDRDAGRNSEVHYRLEDPNGVFGLTFKEDGPIISLVVQTALDRETRDFYEVKLEAADC
GSNPLSATATLIVTVTDVDDNCPSFSPDNPRSVTIPGDSPRSMLVAQVRAIDPDSATNAA
IIYSLSPKVSERAKKLFSLDSLTGDIRLAQDLHSDTSEELLLKVLASSQHCPPADTLVTV
SILPKAYRELMIKIAFIGEHQKGAMVLPENQPPTALAILELEGDNSFISSSLTIENKVPF
SLSPQNGKYLLSTSKPLDHEMKSDYSIGVVARGTSADGSASAPSRHILRVMVADVNDNAP
NFLRSHYQLEVEENNRPGMTLLHVSASDADGGCNGRVTYRLGNHTSTVFSVHPVTGRLSA
STSLDREQQAAHLIRVFARDSGSPPLESAATVSVRVLDQNDNAPVFVTPHFIFFVPEDVP
LFTEVGAVSVSDPDEGDNGNMELFFKNNGGPFCVNSTQGILHTTTNLDHEIEQRYELYLL
ASDRGYPSALTSTSRVTIFVVDVNDNPPKVILPSSNSSCLTVPADTIAGTVVTKIHAIDE
DSGLNSEVTYTVVAPEPARSTAVFKVDSRSGNITTAEQLLQKDLGMHHLFVVVRDQGKPI
PLYTTVWVNLLVSS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
tctattcggttttccgtccctgaagagcaggagcctggcactctggcagggtccctcgga
aaacattttccacctccgtaccagctcctgacccccgagtttttgtggatggagaaaatc
acaggcgacttctacaccactgagagaaagctggaccgggaagctctctgccccgaggag
acagaagctgagcgctgcattattctgctcaccgctgttgtgggaccctcaggagaccta
atacagtttcctgtgatcatagaagacgtcaatgacaatgagccttattttgaaaagagc
gaaatacacctctgggtgtctgaggatgcaacagtggggaccagtttattattagacgtc
caggctgtggacagagatgccggccgtaatagcgaggtccattaccgcctggaagaccca
aatggagtttttggtttaacgtttaaggaagatgggcccatcatctcgctggttgtgcaa
acagctctagacagagagactcgggatttctatgaagtaaagctggaggccgccgactgc
ggctccaatcctttgagcgccacagcaactttgatagtcacggtgacagatgtcgatgac
aactgtccaagctttagccccgacaaccctcgcagtgtcactattcccggagactcccca
agaagcatgttggttgctcaggtcagagccatagacccagattcggccactaatgctgcc
atcatttactccctcagtcccaaagtctccgagagggccaagaagctgtttagccttgac
agcctcactggagacatcagactagcacaggacctccacagtgacacctcagaggagctt
ctgttgaaagtgttagctagcagccagcactgccccccagcagacactctagtaaccgta
tccatcctccccaaggcctaccgagagctgatgattaagattgcattcataggtgaacat
caaaagggggctatggtgttaccagagaaccagccccccacagccttagccattttagag
ctggagggtgacaacagctttataagctcctcacttaccattgagaacaaagtgcctttt
agtttgagcccccagaatggtaaatatctgctttccacatcaaagcctctcgaccatgag
atgaaaagcgactacagtattggtgtggtagcgcggggaacatcagcagatggctccgca
agtgctccttccaggcatattctgagggtgatggtggcagatgtcaacgataatgccccg
aatttcctacggtcccactatcagctggaggtggaggaaaacaaccgcccagggatgacg
ctgctgcacgtgtcggcctcggacgctgacggtggatgcaatggcagagtgacgtacaga
ctgggtaatcacacatccactgtcttcagcgtgcacccggtgacaggtcgactgtctgcg
tcaacctctctagacagagagcagcaggctgcacacctgatcagggtgtttgcacgagac
agtggatctccacctctggagtcagcggctacagtgtccgtccgggttctggaccagaat
gacaacgcgcctgtttttgtgacgcctcatttcatctttttcgttcctgaagacgtgccc
ctgttcactgaggtgggggccgtgagtgtgtcggacccagatgagggagacaacggaaac
atggagctgttctttaaaaacaacggcgggcctttctgtgtcaatagtacccaggggatt
cttcacactacaactaatttggaccacgagatagagcaacgctatgaactctacctgctg
gctagtgatcgtgggtatccgagcgctctgacttccacctccagggtcaccatcttcgtg
gtagatgtcaacgacaacccaccaaaagttatccttcctagcagcaactcttcatgcctg
actgtccctgcagatacaatcgccggcaccgtggtgacgaaaatccatgccatcgatgag
gactccgggttaaattccgaggtcacgtacactgttgtggctccggagcctgcacgaagc
accgctgtcttcaaggtggattccaggtcagggaacatcacaacagccgagcaacttcta
cagaaggatttgggaatgcatcatctgtttgtggtggtcagagatcaaggaaaaccaatt
cctttgtataccactgtctgggttaatctcttagtcagcagc
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