Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017164G001
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Entry
GSTEN00017164G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13210
far upstream element-binding protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00017164G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00017164G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
GSTEN00017164G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GSTEN00017164G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MecA
Motif
Other DBs
NCBI-ProteinID:
CAF99174
UniProt:
Q4SJK8
LinkDB
All DBs
Position
4
AA seq
561 aa
AA seq
DB search
MVMMAGLVQEQASVAQPGTKDDFADTIRRVRQMAAKMGDQPNMNSSPPVIDPSLYGFGGQ
KRSLDNGVGNHLGSMVHQRALATEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASD
SGGMLDRPCTLTGSPENIEQAKRLLNEIVEQCRYGPGFHCDMDGNGSIQQILIPANKVGL
VIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITGDPQKVQQARELVVKLIRDKD
QGDFRVGRADFGSKMGGSTLDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGIS
PDRVAQVMGQPDHCHHAVHIINELVQTAQERDGFGGVMGRRGRGDCNMGGPGGLQEVTYA
VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPNIRIFSIRGTPQQLEKARQL
IDERIGGPVMGGSSNFGMNPYNQGPATPPQHGPQTFMTGGWGTFFQIWQPQGQQEHTHNG
SQTGQMDWEQYYKKLGKTRPRAALRSITKPGARQQVLDLSRPPVLISTPGWTSTGSRWPT
STRAHRRRRPRVFRTIRRLPR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatggcagggctggttcaggaacaggcctcggtggctcagcccggaaccaaa
gatgacttcgcagacactatacgccgagtgcgacagatggcagccaagatgggggaccag
cccaacatgaacagctcccctccggtcatcgacccctctctgtatggttttggaggccag
aaacgttcccttgacaatggagtcgggaaccaccttggttcaatggtacatcaaagggct
cttgcaacagaagacttcaaagtgcctgataaaatggtcggattcatcattggaaaagga
ggagagcagatctcaagaattcagctggaatctgggtgtaagatccaaatagcttcagac
agtggaggcatgttggacaggccctgcaccctgacaggcagcccggagaacatcgagcag
gccaagagactgctgaatgaaattgtggaacagtgtcgctacggtcccggcttccactgc
gacatggacggcaacggctccatccagcaaatcctcatccccgccaacaaagttggccta
gtcatcggcaaaaaaggagagaccatcaaacaactgcaggagagaacaggagtgcagatg
ataatgattcaggacgaccccctccccactggagcagataagcccctgagaatcaccggg
gatccccagaaggtgcagcaagcccgtgaactagtggtgaagcttatcagagataaagac
caaggagacttcagggttggcagagcagactttggatccaaaatgggtggaagcactctg
gatgtggttgtgcccaggtttgctgttggaatcatcattggcaggaatggagagatgatc
agaaagattcagaatgatgcaggtgttaggattcagttcaaacaagacgatggcattagt
cctgaccgtgtcgctcaggtgatgggccagcccgaccactgtcaccatgcggtccatatc
atcaatgaactggttcagaccgctcaggagcgagatggttttgggggtgtgatgggccgc
cgaggacgaggggactgcaacatgggaggacctgggggactgcaggaggtgacatacgca
gtaccagctgacaagtgtggcctggtcattggcaaaggcggagaaaccatcaagaacatc
aaggagcaatcccgcgcccatgtggagcttcagagaaacccgccgcccaacactgacccc
aacatacgcatcttctccatccggggcacccctcagcagttggagaaggcccgtcagctg
atcgacgagagaattgggggtccggtaatggggggcagcagcaactttggtatgaatccc
tacaaccagggaccagccactcctcctcaacacggccctcagaccttcatgactggagga
tggggcacttttttccaaatatggcagcctcaaggccaacaggagcacactcacaatgga
tcccagacgggccagatggactgggagcagtattataaaaagctaggcaaaaccaggccc
agagcagcgctccggagtataacaaagcctggggccagacagcaggtcctggatctcagc
agacctccagtcctgatttcaacgcctgggtggacttctacaggcagccgatggcctact
tcaaccagggcacaccgcagacgcaggccccgggtcttcaggaccattagacgactgccc
aggtga
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