Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017185G001
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Entry
GSTEN00017185G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00017185G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
GSTEN00017185G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-ProteinID:
CAF99193
LinkDB
All DBs
Position
4
AA seq
1986 aa
AA seq
DB search
SERLSCSFSFFLHGESNVCTSVEIAQHQPAFHITENHIRLAQTSVTPVQVILSPYGLSGT
LTGQSYKMSDPATRKLMEEWSYFYPIVLQQREGSGEKEAEDKSQAYDSSCHVAVEVIVGG
VRMTYPAALVLIAQGDLPAEQPPPVPAAQGLSREPNHCSVPLTPPTSPQQPCSADSGFVT
SVSSVPTPDSSIGVPSISPKHSGKTLTCQVVHQAWRECYLNQPQYLSNKPSEATAKKEVP
NGLTTWDFNDLGERVSCTCSRLKHQKLNLTSTPSTNPQLSANQTLYPSSLPKHKTSEKME
KADKQSKRPALIPFHHRLSVTQEGPLEQDSSGGPQLAGLVVLDPPQEPLAALPSCKYPKP
LSNGRKVPESLLQSPVSPLPPTLSPHPQVREPEVLDVPMDLPACPEGPSGLGLTPSETAV
YSALLRKKESGAGWWRGFRTPRTDKADFRAPDLPTDILEDLKTDKYMDAPLKRLYTQTQR
RYKISDARVREHIQTLGLYQQPGMEVLREPGDDPYDFKEGDIEYTFSSSKRLKSQGREST
KKLKGEEITSNGALPDGKDAMSIFNSAPKPGTTCQRVILFLFVKSLFSFFSTQIQVVFFI
VSEQSDPDDGAAKPNPSLTREKDLVVNISDLDNIFDEDDEELGTVYTNHQSTKIPASIED
RPVGKEGRVAVSYPSTIADLQRMFPTPPSLEQPPAFSPITTYRDTPSQEPPSGAADHLLP
LTSAHLLEYKMETEEGVASPRLEDNKLQIGSSMFAPLFCLPSQSLPPLKIPDQCYYRPSW
SLLPKIEHFPVVLQNTAFTRDGYTNIPSVNTEHEYSLLSATTASVSTTVGILPSPATPRF
SVPTPRTPRTPRGINAASSGQGSVKQDGTELSSPASTPSTSLPLSSVEPLARRGPSLPEA
HSLYTVLLLSDSVLNVFKDRNFDSCCICACNMNVKGADVGVYIPDSTCEDQYRCMCGFSA
IVNRLLSHGTGLFLEDELDIFGRTSEVGRAAERRLALCRRDPTMGNPKAKKTQDVSLASP
SFMVLLQEQCSQPISSLASLHLPLRCSCHGRKGALLQSWMSEKQWADANDACVDCYNALE
QGLLYVDNPTGGKVDSTVVRSTAFHSWHQTNGEKHAFSVVEMSTLSSQDMVRMLLSLQPF
LQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYDCILLKMFLFAKGSEESPEPLP
IPTVLLGYDRERDFLALSPLALPFWEKLLLEPYGGQRDVAYLVLCPNSPSLLAAAQAFFQ
ELSAVYETCRLGKHRPLAKVSKDGLIRVGEQVESEKLEELDVDQLCTGPWSGQQHTDNLN
KLKLYAYACKQQLGPQLSGLHLDSSLLVPPKATPPTTSVQPASSGQPQPPGPDGEQVPGS
TTSGNVQTPIGAASAQTGEAPQGAASESKGPPSSAAPASAPAETPELTSEQSRIGIPTLG
DTIDGHTNPPAVVIYIVDAFLSGSGRNEVEEEGDEVETGSIWLLGLLRCYTEMLQTLPEG
IRPALVLQVVSCQHLLQPASGESHLYLQRLRSLAFSCYSQCRRLLPQQTYIKSLTGFGPA
STVSSHPHPLQVYSPPFILGPTRPKQPEQGEIWAELPPKCNVLFVGYCLSHDQRWLLVSC
TDQQGELLETSIINIDVPNRARRPKFSARKMGLQKLWEWCVGLIQMTSLPWRIVIGRLGR
LGHGELKDWSSLLGEHSLHSVCRQLREACRMCEISAAESPTIVSACLVAMEPQGSLVVMP
DAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYPTEDNSDDLPF
DLPFPDELENDIGHDMMLITGNLHSSPNTSPVPSPGSPSMMGMGAHFQHAKREGERLLSR
DSPPEELKQQPLALGYYVSTAPANGLPHWFWASCPQAESQCPLFLKASLHHHISIAQSDE
LASEKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVHLAVLVQMYN
AILNML
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
agcgagcgcctgtcgtgctccttctccttcttcctccatggcgagagcaacgtgtgcacg
agcgtggagatcgcccagcatcaaccggcgttccacattacggaaaaccacattcgcctc
gcacagacctccgtgacaccagtacaagttatcctgagtccttacgggctgagcggcact
ctaacgggacagtcctacaagatgagtgacccggccacgaggaagctgatggaggagtgg
agctacttctacccaatagtcctgcagcaacgagaagggagcggagaaaaggaagcggag
gataaaagccaggcgtacgacagtagctgtcacgtggccgtggaggtcatcgtaggtggt
gtgaggatgacctacccagctgctttagtgctgattgctcagggggatctaccagcggag
cagcccccgcccgttcccgcagctcagggcctcagcagggagccaaaccactgcagcgtg
ccgctcactccacccacgtcaccacagcagccgtgttcagcggacagcggctttgtgacg
tcagtctccagtgttcccacacccgacagcagcatcggggtccccagcatcagcccaaag
cattctgggaagacgttaacctgccaggttgttcatcaggcctggcgggaatgttatctc
aaccagcctcagtacctatcaaataaaccatcggaagcaacagctaagaaggaagtgcca
aatggattaaccacgtgggacttcaacgatctgggagagagagtttcctgcacgtgttcc
aggttaaagcatcagaagctgaatctgacatcgacaccttcaactaatccccagctcagt
gccaaccaaacgctttacccctcctccctccccaaacacaagaccagtgaaaagatggaa
aaagctgacaagcagtccaagagaccggccctgatccccttccaccatcggctgtccgtc
acacaggagggccccttagagcaggactcatccggaggcccccagcttgctggacttgtg
gtgctggaccccccgcaggagcctctggctgctctgccaagctgcaagtaccccaaacct
ctctctaatggccgaaaagttcccgaatcccttctgcagtcgcccgtgtctccacttcca
cccacgctcagcccacatccgcaagtgcgagagcctgaggtcttggatgtgccgatggac
ctgcctgcgtgtccggaggggccctcggggctggggctgactcctagcgagaccgctgtg
tattcggctctgctgaggaagaaggagtctggggctggctggtggaggggcttcaggact
cccaggacggataaggctgacttcagagctcctgatctccctaccgatattttagaggat
ttgaagacagacaaatacatggatgcccccctaaaaaggttgtacacacagactcagagg
aggtataaaatctcagacgcgagggtcagggagcacatccagaccctgggcctgtaccag
cagccggggatggaggtgctgcgggaacctggagacgatccctacgactttaaggaagga
gacatcgagtacaccttctccagttccaagaggttgaagagccagggaagagaatccacc
aagaagctcaagggagaggaaatcaccagcaacggagcgctgcctgatgggaaagatgcc
atgtctatatttaattcagctccaaaaccaggtacaacatgtcagcgtgttatccttttt
ctctttgtcaaatccctgttttccttcttctccactcagattcaagttgttttttttatt
gtttcagaacaatcggacccagatgacggagcggcgaagcccaatccctcactgacccga
gaaaaagacctggtggttaacatttctgatttagacaacatttttgatgaagatgatgaa
gagttggggactgtttacactaaccaccagtccactaagataccagcatccatagaagat
cgtcctgtgggaaaagaaggcagagttgcagtgtcgtacccttcaacgatagccgacctc
cagcgcatgttccccacgccgccgtctctggagcagcccccggccttctctcccatcacg
acctaccgggacactccgagccaggagccgcccagcggagctgctgaccacctgctgcct
ctgacctccgcccatcttctggagtacaagatggagacagaggagggcgtggccagcccc
cgactggaggacaacaagctccaaataggctcgtccatgtttgcgccgctgttctgcctg
cccagtcaaagtctgccaccgctcaagatccccgatcagtgctactaccgtccgtcctgg
tcgctgttgcctaaaatagagcatttccccgtggtcctgcagaacaccgctttcaccaga
gatggatacacaaacatccccagtgtcaacacggagcacgagtacagcctgctgagcgcc
accaccgcctcagtgagcaccactgtaggcatccttccatcccctgccactccccgcttc
tctgtgcccactccacgcaccccgcgcactccacggggtattaacgctgccagctctggg
cagggctcagtaaagcaggacggcaccgagctcagctcgccagcctccacgccttccacg
agcctgcctctgagctctgtagagccgctcgcccgcagagggccgtccttgcccgaagcc
cacagcctgtacactgtcctcctcctctcagactccgtcctcaacgtttttaaggaccgc
aactttgacagctgctgtatctgtgcctgtaatatgaatgtgaaaggagctgatgtcggg
gtgtatatccccgattccacgtgtgaagaccagtaccgctgcatgtgcggcttcagtgcc
attgtgaacaggctcctgtcacatggcacgggcctcttcctggaggacgagctggacatt
ttcggccggacctccgaggtaggccgagcggctgagaggaggctggctctgtgtcggagg
gacccgaccatgggaaatccaaaggccaaaaagactcaggacgtcagtctcgcctcccca
tcgttcatggtcctcctgcaggagcagtgctcccagccaatctcctcactcgcatcgctg
catctcccactacgctgttcctgccacggccgcaagggggcgctgctccagagttggatg
tccgagaagcagtgggccgacgcaaacgacgcctgtgtggactgttacaacgccttggaa
caggggcttctgtatgtggataaccccacaggagggaaagtagattctaccgttgtcaga
agtacggccttccactcctggcatcagacgaatggtgagaagcacgccttttctgtggtg
gagatgagcactctgtcgtcccaggatatggtccgcatgctgctgtccctgcagcccttc
ttgcaggatgccatccagaaaaagagaacagggcggacttgggaaaacatccagcacgtt
caaggtccacttacctggcagcagttccataaaatggccgggcgaggttcctacgactgc
atcctcctaaagatgtttctttttgccaaagggtcggaggagtctccggagcccctgccc
atccctacggtgttgctgggctacgatcgggagagggacttcttggcgctgtccccgctg
gcgttaccgttctgggagaagttgctactggaaccttatggtgggcagcgggatgtggcc
tatttagtgctgtgtcccaacagcccctctcttctggctgcagcacaggcctttttccag
gagctcagtgctgtctacgagacctgccgtctcgggaagcaccgtcctctggccaaggtg
tccaaggacggtctcatacgtgttggggaacaagtggagtcggagaaactggaggagctg
gacgtggaccagttgtgtactgggccctggagcggacagcagcacactgacaacctcaac
aagctgaaactgtatgcgtacgcctgcaagcagcagctgggcccccagctctcaggcctg
catttggacagcagtcttctggtgcctccgaaggccacgcccccaacaacgtcggtccag
cccgcctcttcaggtcagccgcagccccccggccccgatggtgagcaagttccaggttcc
accacttcaggaaatgttcagacgccgatcggagccgcctcggctcagacgggagaggcc
cctcaaggtgcggccagcgaatccaaagggccccccagctctgcagcaccggccagcgcc
ccagcagaaacccctgaactcacttctgagcagtctagaatcggcatccccaccctgggt
gacaccatagacggccacaccaatccaccagctgttgttatttacatcgtagatgctttt
ttgagtgggagtggaaggaatgaagtggaggaagaaggagacgaggtggaaacaggtagc
atctggctactgggtctacttcggtgctacacagaaatgctacagactttgcctgaaggg
attagacctgccctggtgctacaggtggtttcctgccagcacctcctccagccggccagc
ggggagagccatttgtacctgcagcgcctgcgctccttggccttctcctgttactcccag
tgccgacgcctgctgccccaacaaacatacatcaagtccctgacaggctttggaccggcg
tccaccgtcagctctcaccctcaccctctgcaggtctactctccccccttcatcctcggt
ccgacccgtcccaaacagccggaacaaggggagatctgggcagaacttcctcccaaatgc
aacgtgctcttcgtgggttactgcctgtcccacgaccagcggtggctcctggtgtcctgt
actgaccagcaaggggagctcctggaaaccagcatcatcaacattgacgtcccaaacaga
gcacgccggccgaagttttctgccaggaaaatgggactgcagaagttgtgggaatggtgc
gtcggcctcatccagatgacctcgcttccatggaggattgtgattggtcgattaggccga
ctgggccacggggagctgaaagactggagctcgctcctcggggagcattccctccattca
gtctgccgccagctgagggaggcttgtcggatgtgtgagatctcagccgctgagtcgccc
accatcgtcagtgcctgcctggttgccatggagccacagggctctcttgtggtcatgccc
gacgcggtgaccatgggctcggtgtttggtcgcagcaccgctctgaacctgcagacttcg
cagctcaacacaccccaggacgcttcctgtacacacatcctcgtcttccccacttctgcc
acgacccagctggctcccagttcctaccccaccgaggacaacagcgatgacctgcccttc
gatctgcctttccctgatgaactggagaacgacatcggccacgacatgatgttgatcacg
ggaaacctccactcgtctccaaacacctccccggtgccatcgcccggatcgccgtctatg
atgggaatgggtgcgcatttccagcacgccaagagagagggcgagcgtctgctgtcccga
gacagtccaccagaggagctgaagcagcagccgctggctctgggttactacgtctccaca
gcaccagcaaacggacttccgcactggttctgggcctcctgcccgcaggctgagagccag
tgtccgctctttctgaaggcctccctccaccaccacatctccatcgcccagtcagacgag
ctggcgtcggagaaaacgaagaggacgcctcacccgctggactcgaagaccacctctgat
gtgctcaggtttgtgttggagcagtacaatgccctctcatggctgacatgcactcctgcc
acgcaagaccgccagtcctgcctgcccgtccacctggcggttctggtccaaatgtacaat
gccatcctgaacatgctttag
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