Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017378G001
Help
Entry
GSTEN00017378G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13126
polyadenylate-binding protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03015
mRNA surveillance pathway
tng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTEN00017378G001
09123 Folding, sorting and degradation
03018 RNA degradation
GSTEN00017378G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00017378G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00017378G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GSTEN00017378G001
mRNA cycle factors
Stress granule specific factors
GSTEN00017378G001
Spliceosome [BR:
tng03041
]
Complex C
Other components
Complex C specific factors
GSTEN00017378G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MLLE
RRM_1
POP1_C
Motif
Other DBs
NCBI-ProteinID:
CAF99349
UniProt:
Q4SJ33
LinkDB
All DBs
Position
21
AA seq
380 aa
AA seq
DB search
MTDDSGKSRGFGFVSFERHEDAQKADNGFLKENWIQKKVERQAELKRKFEQMKQDRMTRY
QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGGRSKGFGFVCFSSPEEATKAVT
EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMT
AIPQTQNRGAYYPAAGQMAQLRPSPRWPTQGVRPQHFQNMQSAMRSSAPRPQMFGSMRPS
SQLPRMTSSQRVATQAMGPRAATTAPSVTANPVRGVSQYKYATGGQEPLTTSMLAAAPLH
EQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQA
HQAKEAAQKSVTNSAVVPSV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgacagcgggaagtcccggggctttgggtttgtcagctttgagagacacgag
gacgcccagaaggcagataatggctttctcaaggaaaactggatccagaagaaagtggag
cgacaggcggagctcaagcgcaagtttgagcaaatgaaacaggaccgcatgactcgctac
cagggtgtcaacctgtatgtgaagaatcttgacgatggaatcgacgacgaacgtttacga
aaggagttctcgccttttggcaccatcaccagtgccaaggtcatgctggaaggcggtcgc
agcaaaggcttcggcttcgtctgcttctcctccccggaggaggccaccaaagccgtgacc
gagatgaacggacgcatcgtggccaccaagccgctgtacgtcgctctggcccagcgcaaa
gaggagcgccaagcacacctgaccaaccagtacatgcagcggatggccagcgtgcgcgca
gtgcccaaccccgtcatcaacccctaccagccggccccgccctctggctacttcatgacc
gccatcccccagacccagaaccggggcgcttactacccggcagctgggcagatggctcag
ctgcgcccgagcccccgctggcccacccagggtgtccggccgcaacacttccaaaacatg
caaagtgccatgcgctcctcggctccacgccctcagatgttcggctccatgcggccttcc
tcgcagctgcctcgcatgacatccagccagcgtgttgccacccaagccatgggtccccga
gcagccaccacggctccttcggtaacagccaatcctgttcggggggtctcccagtacaag
tacgccacaggaggacaggagccgctgaccacctccatgttggccgctgcgccgctgcac
gaacagaagcagatgctgggcgagcgcctcttccccctcatccaggccatgcacctgagc
cttgcgggaaagattaccggcatgctgctggagatcgacaactcggagcttctccacatg
ctggagtcgcctgagtcgctgcgctcaaaggtggacgaggcggtggccgtgcttcaggcc
caccaggccaaggaggccgcccagaagtctgtgactaactcagccgtcgtgccaagcgtg
tga
DBGET
integrated database retrieval system
