KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017381G001
Entry
GSTEN00017381G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K12831  splicing factor 3B subunit 4
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00017381G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00017381G001
Spliceosome [BR:tng03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GSTEN00017381G001
 Complex B
    GSTEN00017381G001
 Complex C
   U2 SnRNP specific factors
    GSTEN00017381G001
SSDB
Motif
Pfam: RRM_1 RRM_7 YqeH-like_C
Other DBs
NCBI-ProteinID: CAF99352
UniProt: Q4SJ30
LinkDB
Position
21
AA seq 379 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGEQLFH
TDNTEDACVRFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRV
NKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF
INFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADR
PHQLFADAPPPQAAPTPVLTALGAGMPMPGMPPPVCPPVPPPGTMPPAMAHSLAMPPSAG
VQGGGGLPPGPPPFPPGSMHPGPVPPALRGPPPPPMPPPGYGAPRPPPPPPPAFQRGPPM
PPRPPAVPPPVPMRAPMPP
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggccgcgggtccaatttctgaaagaaaccaagatgctactgtgtatgttggcgggttg
gatgagaaggtttcggaaccgttactatgggagcttttcttgcaggctggtcctgtggtc
aacacacacatgccaaaagacagggtcaccggccaacaccagggtgagcaactcttccat
actgacaatacggaggacgcgtgtgtcagattccaaaaacgtctgttgtacgtaaatgaa
actaacgtacacatcttattctcaggctatggctttgtggagttcctcagtgaagaggat
gctgattatgccatcaaaatcatgaatatgatcaagctctatggaaagccaattagagtt
aataaagcctccgctcacaacaaaaacttggatgtgggtgctaacatcttcatcggcaac
ctggacccagagatcgatgagaaactgctgtacgacacgttcagtgcctttggcgtgatc
ctgcagacaccaaaaatcatgcgagaccctgacacaggcaactccaagggttacgctttc
atcaattttgcaagctttgacgcttcggacgcagccatcgaggccatgaatggccagtat
ctgtgtaaccggcccattaccgtgtcctacgccttcaagaaagattccaaaggagagcga
cacggctcagctgccgagcgactcctggctgcacaaaatcctctttcccaagccgaccgg
cctcatcagttgtttgccgatgcaccaccgccacaggctgctcccacgccggtcctcact
gccctgggagctggaatgcccatgcccggcatgccacctcctgtttgccccccagtgccc
ccgcctggaacaatgcccccggcgatggcccattccttggccatgcctccaagcgccggt
gtgcagggcggcggcggccttccaccaggaccgccaccgttccctcccgggagcatgcat
ccaggtcctgtgcctcctgctctgagaggaccacccccacctccgatgcctccccctggc
tacggcgctccacgtccgcctcctcctcctccccccgccttccagagaggcccgccgatg
cctccgcggccccctgccgtccctcctcccgttccgatgcgagctccgatgccgccgtaa

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