Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017616G001
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Entry
GSTEN00017616G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
tng03083
Polycomb repressive complex
tng04110
Cell cycle
tng04330
Notch signaling pathway
tng04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00017616G001
03083 Polycomb repressive complex
GSTEN00017616G001
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GSTEN00017616G001
04350 TGF-beta signaling pathway
GSTEN00017616G001
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
GSTEN00017616G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00017616G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSTEN00017616G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GSTEN00017616G001
HDAC complexes
Sin3A-HDAC complex
GSTEN00017616G001
BRAF-HDAC complex
GSTEN00017616G001
REST complex
GSTEN00017616G001
SHIP complex
GSTEN00017616G001
MiDAC complex
GSTEN00017616G001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GSTEN00017616G001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTEN00017616G001
Chromatin remodeling factors
NuRD complex
GSTEN00017616G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
CAF99510
UniProt:
Q4SIM2
LinkDB
All DBs
Position
21
AA seq
441 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRRMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMAKVMEMYQPSAIVLQCGADSLSGDRLGCFNLTIKGTSGWVCGTEQRCSGGSANGV
AVCARSRQMCGVHEKFQPAPADAGRRGLHHPQRGPLLDVRDGGGLGLLHPQRAALQRLLR
VLRARLQAAHQPVQHDQPEHQRIPGEDQAAPVREPAHVASRARRADAGDPRGRAPPRQRG
RGRGGPRQARLHPGPRQEDSL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactacgatggcgatgtgggg
aactattactacgggcagggccaccccatgaaaccccaccggatccgcatgacgcacaac
ctcctgctgaactatggactttaccggagaatggagatctacaggccacataaagccagc
ggtgaagagatgaccaagtaccacagcgacgactacatcaagttcctgagatccatccgc
ccagacaacatgtctgagtacagcaaacagatgcagagattcaacgttggggaagactgt
ccagtgttcgatggtctgttcgagttttgccagctgtcaacaggcggctcagttgctgga
gcagtgaaactgaacaagcagcagacagacatcgccatcaactgggccggcggtctccat
cacgccaagaagtctgaggcctccggcttttgctacgtcaacgacatcgtcctggccatc
ctggagctgctcaagtaccaccagagggtgttgtacatcgatattgacatccaccacggc
gacggcgtggaggaggccttctacaccaccgacagggtcatgaccgtctcctttcacaag
tatggtgaatacttccctggaaccggagacctgagggacatcggggctgggaaggggaag
tattacgccgtgaactaccccctcagggacggaatcgacgacgagtcctacgaagccatc
ttcaaacctgtcatggctaaagtgatggagatgtaccagccaagtgcaatcgtgctccag
tgtggcgccgactctctctctggagacagactgggctgcttcaacctcaccattaaaggt
accagtgggtgggtctgtgggacagagcagcgctgcagcggaggttctgctaatggtgtc
gccgtttgtgctaggtcacggcaaatgtgtggagtacatgaaaagtttcaacctgcccct
gctgatgctgggaggcgggggctacaccatccgcaacgtggcccgctgctggacgtacga
gacggcggtggccttggactgctccatccccaacgagctgccctacaacgattacttcga
gtacttcgggcccgacttcaagctgcacatcagcccgtccaacatgaccaaccagaacac
caacgaatacctggagaagatcaagcagcgcctgttcgagaacctgcgcatgttgcctca
cgcgcccggcgtgcagatgcaggcgatcccagaggacgcgccccaccccgacagcgggga
cgaggacgaggaggaccccgacaagcgcgtctccatccgggcccacgacaagaggatagc
ctgtga
DBGET
integrated database retrieval system
