Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017695G001
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Entry
GSTEN00017695G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23195
transcriptional repressor CTCF
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00017695G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00017695G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
GSTEN00017695G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
GSTEN00017695G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-met
Zf-C2H2_ZNF451_C
LIM
zf-C2HE
zf-C2H2_6
DTHCT
zf-C2H2_15
Motif
Other DBs
NCBI-ProteinID:
CAF99566
UniProt:
Q4SIG6
LinkDB
All DBs
Position
5
AA seq
814 aa
AA seq
DB search
MEDDVVSMETTQADGKVLPEGVDSLIQGSAIAQQAEVAGNMEMMVMDALDPTLLQMKTEV
LDGGGTMTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATYVDA
STTNKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQGTREEEEEEEEE
AADVEPVVSQQEDPDWSKDPDYQPITTVRKGKKGKKSRLRYGEGDRDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEMGKKCRYCD
AVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCMGDVEDENGTPTPKKG
RRGRKRKMQSRKDDDDDDTEPEPEEMDEEDEMLSEIEVEQAPPVVPIPAPVEPPVKRKRG
RPPKNKPATAAIIRVEDEATGEVDDIIVKKEVGADQDDQEICSEEAVEQVVVGGGKSTIQ
MEELAQEEVAGQEVQLSEAPPKRRPNPRDDPQHDGPVMDASVKSVNTRLGFKKNLFLFFF
FFFFFFSFSFGFRLTNACILKRNKHHCCNLRFHF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatgtggtatccatggagaccacccaggctgatggaaaggtcctgccagaa
ggtgtggattccttgatacaggggtcagccatagcgcaacaggcagaggtagccggtaac
atggagatgatggtgatggacgctctggacccaactctgctgcaaatgaagactgaggtg
ctggacggtggtggaaccatgactgttactggtggagatgagggccagattataaccctc
caggtggtcaatatggaggagcaggcaggagcggcactgggtcttggccagcttcagctg
gtccaggtgcctgttacaacaacgaccgttgaagggctccaagctacgtatgttgacgca
tcaaccactaacaaggatgcagagccagttatttgtcacactctacccttacctgaagga
tttcaggtggtaaaagtgggtgcaaatggggaagtggagactgttgaacaggaggagctc
caggcagcccatgaggagcttcaaggaacaagggaagaggaggaggaagaagaagaggag
gcagcagatgtagagccagttgtgtcccaacaggaagatccagattggagcaaagaccca
gattaccagccgattactactgtcaggaaaggaaagaagggaaagaagagccgcctgcgt
tatggagagggagatcgtgacatggatgtttccgtttatgactttgaagaggagcagcag
gagggcttgttgtcagaggttaacgcagagaaggttgtgggcaatatgaagccaccaaaa
cccacaaagatcaagaaaaaaggggtgaagaagaccttccagtgtgagctgtgtagctac
acttgtccgaggcgttccaacctggatcgacacatgaagagccacacagatgagaggcca
cataagtgtcacttgtgcggacgcgcatttcggacagtcacgttgctgcgaaaccatctc
aacacacacacaggcactcgaccacacaagtgcaccgattgtgacatggcatttgttacc
agcggcgagttggtccgccaccgccggtacaagcacacgcacgagaagccattcaagtgc
tcgatgtgcgattactccagcgtggaggtcagtaagctgaagaggcacatccgctctcac
acgggagaacgacccttccagtgcagtctgtgcagctatgccagcagagacacctacaag
ctgaaaaggcacatgaggacacattcgggtgagaagccatacgagtgctatatctgccat
gcccgctttactcagagtggcaccatgaagatgcacattctgcagaaacatacagagaat
gttgccaagtttcactgtccacattgcgataccgtcatcgcacgcaaaagtgaccttggt
gttcacttgcgaaagcagcactcgttcatcgagatgggaaagaaatgccgctactgcgat
gctgtctttcacgagcggtatgctctcattcagcaccagaagacccacaaaaacgagaag
cgtttcaagtgtgatcagtgtgactactgctgcagacaggagcgccacatgataatgcac
aagcgcacacacaccggggagaagccatttgcctgcagccagtgtgagaaaacattcagg
cagaagcagcttctggatatgcacttcaagcgctaccacgatcccaacttcgtccccact
gcctttgtgtgcagcaagtgcagtaagaccttcacccgcaggaacaccatgctgcgccac
gcggagaactgcatgggagacgtcgaggacgaaaacgggaccccgactcccaaaaaaggc
cgtcggggccgaaagagaaagatgcagtccaggaaggatgacgatgacgacgacacagag
cctgagccggaggagatggatgaagaagatgagatgttgagtgagattgaagtggaacag
gccccaccagttgtccccatcccagcccctgtggagcccccagttaagagaaaacgtgga
cgtcccccaaagaacaagccagcgactgctgctatcatccgcgtggaggatgaggccacc
ggagaggtggacgacatcattgtgaagaaggaggtgggtgccgaccaggatgaccaggag
atctgcagcgaagaggctgtggagcaagtggtggttggtggagggaagtccaccattcag
atggaggagctggcccaggaggaggttgcagggcaggaggtgcagctgtctgaggcgccg
ccgaaacggagacctaacccccgagatgatcctcagcatgatggaccggtgatggatgca
agcgtcaaatctgtaaacacacgtctgggttttaaaaaaaatttatttcttttttttttc
tttttctttttttttttttctttttcctttggatttagacttacaaatgcttgcatccta
aagagaaataaacatcactgttgtaatttaagatttcatttttaa
DBGET
integrated database retrieval system
