Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017780G001
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Entry
GSTEN00017780G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00017780G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
GSTEN00017780G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_17
TPR_12
TPR_10
TPR_11
TPR_6
TPR_7
TPR_Slam
ARM_TT21_5th
Motif
Other DBs
NCBI-ProteinID:
CAF99634
UniProt:
Q4SI98
LinkDB
All DBs
Position
5
AA seq
1210 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGSKACISFNKKDY
RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLA
VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFDTQ
RLKLCMQRVATVSAVVHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKSYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQDKVQADVPPEILNNLGALHFRLGNLGEAKVDGSGEPVT
SLILRSFNQSFKRELCPKYFLASLERAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFH
EAEKLYKNILREHPNYVDCKLENTAEMEHKKKSCFCLISFTVWPTGYLRLGAMARDKGNF
YEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLAL
GNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYYREAR
DVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLARAL
FKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELE
LAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRAKQEQ
ERDLLRQQLLKEQEEKRNKELEEQKKLLEQRAMYVEKTKNLLSFADVPKEMAKEKKKGSS
GAGRRKKGGDMDDFVNDDSDEELPLKKKKKKGVSDSEQEEGEDGEKKARKKKRRPTKGSE
DDSEEEGGAPHAKKQRKLKERKRIEKSKPERLPPSLKGKIKSKAIISSSDSSDEDGLKIA
EDGQQRESGSDSDEDGVHRKRIESDSDSDGGRNRSGSEAESPRRSEGSGGNDSGSDRPVK
KRRVQRQSDSEQSDEESKKSRSASDDESQPGSPVPASEGGSDRASEAPSDNEGSPRRSDN
GSEPEGSNED
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccattgagatccctttacgggacacagatgaggttattgagcttgac
tttgaccagctgcctgaaggagatgaagtcatcagtatcctaaagcaggaacatacacag
ctccacatatggatcgctttggctttggagtattacaaacagggcaaaaccgaggatttt
gtgaagcttttagaggccgctcgtattgatgggaacctcgattacagagaccatgagaaa
gaccagatgacttgtctggacacgttagccgcttactatgtccagcaagcacgtaaagag
aaaaataaagatgcaaagaaagaactcatcacgcaggccacactgctctacacgatggct
gacaagatcatcatgtacgatcagaaccatttattgggaagagcctgtttctgtctgctg
gaaggagacaagatggatcaagctgatgctcagttccactttgtcctcaatcagtccacc
aataacattcctgctttgcttggcagtaaggcctgcatctccttcaataaaaaggattac
agaggtgctttggcttattacaaaaaggctctacggaccaaccctggctgcccagctgag
gttaggctggggatgggtcactgttttgtcaagctcaacaaattggagaaagctcgtctg
gcttttggtcgggccctggagttaaattcaaagtgtgtcggggctctggtcggtttggct
gtcttggagctcaataacaaggaggcagattccatcaagaatggggtgcagctcctttcc
cgagcctacaccattgaccccagcaacccaatggtgctcaaccacctggctaaccatttc
ttcttcaaaaaggattacagtaaggtgcagcacctggcgcttcatgctttcgatacacag
aggttgaagctatgcatgcagagagttgctacagttagcgcagtcgttcacgtgcaggag
gactatgaccaagcatttcagtattactaccaggccacacagtttgcctcttctacattt
gtcctgccgttctttggcctgggacaaatgtatgtgtatcgaagagacaaggagaatgca
gcacagtgctttgaaaaggttttgaagtcctaccccaacaactatgaaacaatgaaaatc
ctgggttccctctacgcagcttctgatgaccaggaaaagagagacattgccaaaggtcat
ttaaagaaggtgacggaacagtacccagatgacgtggaggcctggatcgagctggctcag
attctggagcagactgacatccaaggagcactgtcggcttacggcacggccacccgcatc
ctgcaggacaaagtgcaggccgacgttcctcctgagattctcaacaacctcggggcactt
cacttcaggctcggcaacctcggggaggccaaggtagacggcagtggagagcccgtcacg
agcttgatcctacgcagttttaatcagagttttaaacgggagctgtgtccgaaatacttt
ctcgcctcgctggagcgggccaaagcggaaggagaacacgacgagcattactacaacgcc
atttctgtgaccacatcctacaatctagcccgtctgtacgaggcgatgtgtgaattccac
gaagcagagaaactgtacaaaaacatcctgagggagcacccaaactatgttgactgtaag
cttgaaaacaccgcagaaatggagcacaagaagaaaagctgtttttgtttgatttcattc
actgtttggcccacaggttatttgcgtctgggagcgatggctcgtgacaaagggaatttc
tatgaagcttctgattggttcaaagaagcccttcaaattaatcaggaccacccagatgcc
tggtccctgataggcaaccttcacttggccaaacaggagtgggggccaggtcagaagaaa
tttgaacggattttgaaacagccgtccacacagaatgacacgtactccatgttagctttg
ggtaacgtgtggttgcagactctgcatcagcccaccagggacagagaaaaggaaaagaga
caccaagaccgagccttagcgatatacaaacaagtcctgcgaaatgaccccaagaacctc
tatgctgccaatggcattggtgctgttttggctcacaagggctactacagagaggctcgc
gatgtgtttgcacaggtgagagaggccacggcagacatcagcgacgtctggctcaacctg
gctcacatctacgtcgaacagaagcagtacatcagcgccgtgcagatgtacgagaattgc
ctgaagaaattttacaaataccagaacacggaggtgctgctgtacctggctcgagcgctc
ttcaaatgtggcaaactccaagagtgtaaacagatgctgctgaaggcccgtcacgtggct
cccagtgacacggtgctgatgttcaacgtggccctggtgcttcagagacttgccacgctc
gtgctgaaagatgagaaaagcaacttgaaggctgtacttagcgccgtcaaggagcttgag
ctggctcacaggtacttcagctacctgagtaaagctggagacaagatgaggtttgacctc
gctctggctgcgtctgaggccaggcagtgctctgatctgctgagtcaggctcagtaccat
gtggctcgggccagaaagcaggacgaagaggagaaggagctccgcgccaaacaagaacag
gagagggacctgctgcgtcagcagttgttaaaggaacaggaagaaaagcgtaacaaagaa
ctggaggagcagaagaaactcctggaacagagagccatgtacgttgagaagaccaagaac
ctgctcagctttgcagacgttccaaaagaaatggcgaaggagaagaagaagggaagcagt
ggtgcaggacgccgtaagaaaggaggcgatatggatgattttgtcaacgatgattccgat
gaggagctgccattgaagaagaaaaagaagaagggcgtcagtgacagtgagcaagaggag
ggcgaggatggagagaagaaggcccgcaagaagaagaggagacctactaaaggaagcgaa
gacgacagtgaggaggagggaggagccccgcatgctaagaaacaacggaaactgaaagaa
cgtaaaaggatcgagaagtccaaacctgagcgtctgccgccatcacttaaaggaaagatc
aagtccaaggccatcatttcttcctccgattcttccgatgaggatggactgaagatagct
gaggacggacaacaaagagagagcggctcggattctgacgaagatggcgtccacagaaag
cggattgaatccgacagcgactcggatggggggaggaaccgttcaggcagcgaggcagaa
agcccgcggcgttccgaaggctccggaggcaacgactctggcagcgatcgtcctgtaaag
aagagaagagtgcaacgccagtccgactcagagcagtcggatgaagagagcaagaagagc
cgctccgcatcagatgacgaatcccagcctgggtcgcctgtcccagcatccgagggaggg
tcggacagagcatccgaagcaccgtcagacaacgagggctccccacgccgctcagacaac
ggatcggaacccgaaggctccaatgaggac
DBGET
integrated database retrieval system
