Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017943G001
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Entry
GSTEN00017943G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10609
cullin 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00017943G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00017943G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00017943G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00017943G001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00017943G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
GSTEN00017943G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSTEN00017943G001
TCR (transcription coupled repair) factors
Cul4-CSA complex
GSTEN00017943G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GSTEN00017943G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-ProteinID:
CAF99757
UniProt:
Q4SHX5
LinkDB
All DBs
Position
5
AA seq
721 aa
AA seq
DB search
DRPKLSENYTEDTWLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQV
CEDHVQAQIHHFFFFCIIPLNLDLTEDLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDR
TYVLQNSLLPSIWDTGLELFRTHIVSDSAVQKRTVDGILEQIELERNGETIDRSLLRSLL
GMLSDLQVYKDSFEDRFLTETDRLYAAEGQRLMLERDVPEYLHHVARRLEEENDRILSYL
DQSTQKPLIGCVEKQLLGEHITAILQKGLGTLLDENRVTELTLLYQLFSKVKGGLPTLLQ
FWRDYIKAFGGEIVCTPEKDKDMVQDLLDFKDKMDNVAHCCFARSEGFINAMKEAFETFI
NKRPNKPAELIAKYVDSKLRAGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLA
KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQSEP
SNIELTVNILTMGYWPSYTPMEVHLPTEMVKLQEVFKMFYLGKHSGRKLQWQSTLGHAVL
KAEFKEGKKELQVSLFQTLVLLMFNEGEEFSVEEIGTATGIENGELRRTLQSLACGKARV
LNKNPRGKDVEDGDRFNFNNEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDA
AVVRIMKMRKTLSHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYV
A
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gacagacctaaactatcggagaactacacagaggacacgtggctgaagctccgagatgca
gtaggtgccatccagaacagcacctctatcaagtacaacctggaagaactctatcaggca
gtagaaaacctctgttcatacaaagtctccccgacgctctacaagcagcttcggcaggtc
tgtgaagaccatgtccaggcccagatccaccatttcttcttcttttgtattattcccctt
aacctggatctcactgaggatctggacaacctttccttcctgaagagaatgaatcgctgt
tggcaggaccactgcaggcaaacaatcatgatccggagtatttttctcttcctggatcgc
acctacgtccttcagaactccttgctcccctccatttgggacactgggttggaactgttt
cgcacccatatcgtgagcgacagcgcagttcagaagcgcacggtggatggcattttggag
cagatcgaactggagcgcaatggagaaacgatagaccgaagtctgctcaggagcctcctg
ggcatgctgtctgacttacaggtgtacaaagactcatttgaggatagatttttgaccgag
accgaccgtctgtacgcagcagagggacagcggctgatgctggagagggatgtgccggag
tatctgcatcacgtggctcggcgtttggaagaggagaacgatcgtattttgagctacctc
gaccagagcactcagaaaccactcattggctgtgttgaaaaacagcttttaggagaacac
ataactgcaatattacagaaaggtctgggcaccctgctggatgagaatcgcgtgactgag
ctgactctcctttaccagctcttcagcaaggtgaaaggaggacttcccacactgctgcag
ttctggagggattacataaaggcctttggtggagagatagtgtgtactccagaaaaagac
aaggacatggtgcaagacctgctggacttcaaggacaagatggacaacgttgcacactgc
tgttttgcacggagcgaggggttcatcaacgccatgaaggaggccttcgagacgttcatc
aacaagaggccaaacaaacctgcagaactcatcgccaagtatgtcgattcaaagttgagg
gcgggcaacaaggaggctacagaagaggagctggagaggatcctggacaagataatgatc
atctttcgttttatacacggaaaagatgtgtttgaagcgttttacaagaaggacctggca
aaacgtcttttggtgggcaagagtgcttctgttgacgctgaaaagtcaatgttgtccaag
ctcaaacatgagtgcggagcagcatttaccagtaagctagaggggatgttcaaggacatg
gagctgtccaaagacataatgatccagtttaaacagtatatgcagaaccagagtgagcca
agcaacatagaacttactgtcaacattcttaccatgggttactggccttcatataccccc
atggaggtccacctgcccactgagatggtaaagctccaggaggtgtttaaaatgttctac
ctgggtaagcacagtgggaggaagctccagtggcagtccacactgggccacgctgtatta
aaggcagagtttaaagagggtaaaaaggagctgcaggtttctttgttccagacgctcgtg
ctgctaatgttcaacgagggggaggaattcagcgtggaggagattggcaccgctaccggc
atagagaacggagagctcaggcgtacactgcaatccctggcctgcggaaaagcccgcgtc
ctcaacaagaacccccgcgggaaagacgtggaggacggagaccgcttcaatttcaacaat
gaatttaagcacaagctgttccgcatcaagatcaatcagatccaaatgaaagaaacggta
gaggagcaagtcagcaccacagaacgtgtgtttcaagacaggcagtaccagatcgatgca
gctgtggtgcgcatcatgaagatgaggaagaccctcagtcataacctgctggtgtcagag
ctctacaaccagctgaagtttcctgtcaagccgggcgatctgaagaagagaatcgagtcg
ctcatagacagagactacatggaacgtgacaaagagaccccgaaccagtaccactatgtt
gcc
DBGET
integrated database retrieval system
