Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017955G001
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Entry
GSTEN00017955G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00017955G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00017955G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
CAF99764
UniProt:
Q4SHW8
LinkDB
All DBs
Position
5
AA seq
711 aa
AA seq
DB search
LLWAHALTLKNLNYSVPEEQGPGTVIGNIAKDARLGPEQIGQGGPGKKANFRVLENSAPH
LIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQDINDNSPTFP
SDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVKSRGDGSKFP
ELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFDQPSYVVEIP
ENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIKIQGEIDYEE
SPVIEIDIQAKDLGPNSIPGHCKVTVKVVDRNDNLPSIGFVSVRQGAISEAAPPGTVIAL
VRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREVQDEYNVTIVAKDNG
NPSLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDPDLGQNGTVY
YSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKILAKDAGSPHLESNTTV
RISILDVNDNIPVIVLPILLNDTAEIHVPRNVGVGYIVTTPLHAPIMSQLHGAKISVAIV
HTDNFPTEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSA
KEALKLKATGIKPAPLEQGEFSLVVSPTAERNAEPRALRSITFCIHADRAP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ctcctgtgggctcatgccctgacattaaaaaacttgaattactctgtcccagaggagcag
ggtccagggacagtgattgggaacattgccaaagatgccagactggggcctgagcagatt
ggacagggaggaccggggaaaaaagctaacttcagggtgctggagaactctgctccacat
ctaatcgacgtggacccacaaagcggactgttatacacgaagcagcgtattgacagggaa
acgctttgcaagaggaaccccaagtgccagctctccatggaggtgtttgccaatgacaag
gaaatctgcatgatcaaaatagatattcaggatatcaacgacaactcgccaacttttccc
tcggaccagattgatattgacatttctgaaaatgcagtgccaggaacacgttttcctctg
accagtgcacatgacccagacgcgggggaaaatggcctgaaaacctatcaaataacacgt
gatgactacaatcttttttctttggaagtaaaatcccgcggggatgggagtaaatttcca
gaattagttattcagcgaccgctggaccgagaagagagaagccatcacactcttattttg
tcagctaccgatgggggggagtatcctcgctctggtaccatgcagataaatgttaaagtt
attgattccaatgacaacagccctgtgtttgatcaaccttcatatgtagtggaaattcct
gaaaattcacctcccggcaaagttctaatcgatttaaatgctactgatcctgatgagggc
aacaatggacaagtagtctattcttttagcggctatgcccccgagagaatccgggaactc
ttttccatagactcaagaacgggggttataaaaattcagggtgaaattgactatgaagag
agcccagttattgagattgacattcaggcaaaagatctaggtccaaattcaattccaggc
cattgtaaagtcacagttaaagtagttgacagaaatgataacttgccctctatcggcttt
gtgtccgtaagacaaggagccattagtgaggcagcacctccaggcacagtcatcgcacta
gtccgcgttacagacaaggactctggaagaaacgggcagcttcagtgtagagttcttggt
aatgtcccttttaaactggaggagaactatgataacttctacactgtagtaacagatagg
cccttggatagggaggtccaggatgagtacaacgtcaccattgtagccaaggacaatggc
aacccttctttaaactccaccaaatccttcactgttaaaattttagatgagaatgacaat
gttccacgtttcaccaagtcagtctaccttcttcagatacccgagaataacatcccaggg
gagtatcttggatccgttttggcacatgacccagaccttggccagaatggtactgtgtat
tacagtataatcaactcaaacgtgagtggaggtgatgtcaacacctatgtcaacgttaac
gctgccaatggtgccatctacgcagttagatcattcaactatgaacaaatcaagtacttt
gacttcaagattctcgcaaaagatgctggatctccccacctggagagcaacacgacagtg
cgaatcagcatcttggatgtcaatgacaatatccctgtgatagttctgcccattttgttg
aacgatacagccgaaatccatgtgccgcgtaacgttggcgtcggctacatcgtcacgacg
cctctgcatgctcctattatgagccagctgcacggtgcaaagataagtgttgcaattgtt
catacggacaattttcctactgagcctaactatatgggtagcagacaacagtttgttcaa
agtagttcaacatttaaggacccggagcgagcgagcctcagagacagtggtcacggtgac
agcgaccaggcggacagcgaccaggacaccaacaagggttcctgttgtgacatgtctgca
aaagaagccctcaagttgaaggctacaggaattaaaccagcacctttggaacaaggtgag
ttttcactagtagtttcaccaaccgcagaaagaaatgcagagccacgtgcacttcgatca
attactttttgtatccatgcagatcgagctccttaa
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