Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017967G001
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Entry
GSTEN00017967G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16498
protocadherin delta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
GSTEN00017967G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tng01009
]
GSTEN00017967G001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00017967G001
Protein phosphatases and associated proteins [BR:
tng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTEN00017967G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00017967G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
7TM_GPCR_Str
Motif
Other DBs
NCBI-ProteinID:
CAF99772
UniProt:
Q4SHW0
LinkDB
All DBs
Position
5
AA seq
857 aa
AA seq
DB search
YIVLLYSSPPFCLANFNQAKELIYKIKEGLPKGTYIGAIGLDLNLDFTVDPPFSFSFAQK
KVNEQYVFLNNTSGELYTTATEIDRETLCPDSHEQWGCILPLDVFVLPQQYFQLVKVKIL
IQDVNDNRPKFPVDQISITIPENALVNTRYAVEQSAMDPDLGVHGVQTYWLVNDFGVFTL
DVEENDGGELTPFVIVTEALDRETQAEYVTDIIAEDGGTPPLLGAATLIILITDVNDNCP
QFTESQINVTLHGNASKGTHLARLHAFDPDLGANAQISYAYSERMPRDTRSLFHLDKITG
VIKLAKKLDTGATTFYKLTVLANGPGCIPAVSTIHVNIIKIVTGPPAVITRYIAPEKDGV
VTLKESEPAFSPIAFFTVKNIGINQKVECYLEGSGPFRLTPYQLLRNEYLLETTENLDYE
KIRDYELVVVARKTQDLVIKTFLKVQVLDENDNAPVFEQSLVKILIDENNSPNTFLTQLQ
ATDQDSEERGEVVYLLGGDAPEIFVLDRVTGVLTVATSLDREEKETYRFIVRAVDKGTPK
RESIATVVLTVQDRNDNSPRFLNKDFTFFVPENFPGYGEIGVMSVTDADAGENGWVALSI
VNGSDTFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEPALSCVTMVTVLLLDVNDN
PPIVLFPQSNQSYMLVLPSTLPGTSITEVYAVDRDTGMNAVIAYSIIKRKGGDPGSFAID
PETGNITLKRELSNRGLHSLLVKVSDHGQPEPLYSTVMVNFFVNETVSNESYIQSLLTKE
ADIEVEERPWYISRMREGPERYESLNCQPVLIVLSVMCLGLFFLVIMLTSFLCLRRFKKH
RKKQSEAEIPLKMKNDL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
tacatcgtcttgctttacagcagcccccctttctgtctagcaaatttcaaccaagcaaaa
gagctcatctataaaataaaggagggattaccaaagggcacctacattggagccattgga
ctggacttgaatttggattttactgttgaccctcccttttcattcagttttgcacaaaag
aaggtcaacgaacagtatgtgtttttaaataataccagcggggagctttacacaactgcc
acagaaattgaccgggagaccctttgtcctgacagccatgagcaatggggatgcatcctt
cctctggatgtcttcgttctaccgcagcaatattttcagctggtcaaagtgaaaatttta
atccaggatgtaaacgacaacaggccaaagttccctgtggatcagatttccataactatt
ccagaaaatgctctcgttaacactcgttacgccgtggaacagtctgcgatggaccccgac
ctaggtgttcatggagtgcagacctactggcttgttaacgattttggcgtgttcacattg
gatgttgaggaaaacgacgggggtgagctgacaccttttgtcattgtgacagaggctttg
gatagagaaacccaggctgagtatgttactgacatcatcgcagaggatggcggaacaccc
cctctgcttggtgcagcaactttaataatcctcatcacagatgtgaacgacaattgccct
cagttcacagagtcacaaattaatgttacactacacggaaatgccagtaaagggacacat
ttggcacgcctgcatgcttttgaccctgaccttggcgctaatgcacagatcagctacgct
tacagtgaacgcatgccaagggacaccagaagcctgttccatttggacaaaatcacaggg
gtaattaaactagcaaaaaagctagatactggcgccaccacattttacaaacttacagtt
ctggccaatggacctggttgtatccctgctgtttccactattcacgtcaatattatcaaa
attgtcactggaccccctgctgttataacacggtacattgctcctgagaaagatggggtt
gtgacgttaaaggaatctgaaccagcattttcaccaattgctttctttactgtcaaaaac
attggcataaaccaaaaggtggaatgctatctggaggggtcaggcccttttaggcttacc
ccttaccaactgctgaggaacgagtacttactggagaccacagaaaacctggactacgag
aagatccgggattatgagctggttgtggtagctaggaaaacccaggacctggttatcaaa
accttcttaaaggtgcaggtgctggatgagaacgataatgctccggtgtttgaacagtca
ctggttaagatattaattgacgaaaacaattcgccaaatacattcctgacccagctacaa
gcaacagaccaggacagtgaagaaagaggagaagttgtctacctccttggaggtgacgct
cctgagatttttgtactggatcgcgtgacaggtgttctgactgtcgctacgtcactggac
cgcgaagagaaagagacttatcggtttattgtgagagccgttgacaagggcacccccaag
agggagtccatcgcaactgtggtgttgacggttcaagaccgcaacgacaacagccctcgt
tttctgaataaagacttcacattctttgtaccagaaaacttcccaggttacggcgagatt
ggagtcatgtctgttacggatgctgatgctggggaaaatggttgggtggccctctcaatc
gtcaatggcagtgacacctttatgatagacacgggccgaggggcactgagggccaagact
tcactggaccgtgagcaacaaggaacataccagctgtggattgaggctgtggatggtgga
gagccagctctttcctgcgttactatggtcacagtgctgttgttggatgtaaatgacaat
ccacccattgtcctttttcctcagtccaatcagtcgtatatgttggtactaccgagcaca
ctaccaggaacatcaattaccgaagtttacgctgtggacagagatacaggcatgaacgcg
gtgatcgcttatagtatcattaagagaaaggggggtgacccaggatcatttgcaattgac
ccggagacaggaaatattactttaaagagggagctcagtaaccggggcctccacagcctt
ttggtaaaggtcagtgatcacggtcagcctgaaccgctttactccacagtcatggttaat
ttctttgtaaatgagacagtgagcaatgagagctacatccagagcttgctgaccaaagag
gctgacatcgaggttgaagagcggccctggtacatcagccggatgagagaggggcccgag
cggtacgagtcgctcaactgtcagcctgtcctgatcgtcctctcagtaatgtgtctggga
ctgttctttttggtcattatgctgacatcatttctatgcttgcggaggttcaagaagcac
agaaagaaacaatctgaagcagaaataccactaaaaatgaaaaatgactta
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