Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018060G001
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Entry
GSTEN00018060G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K24155
rabconnectin-3a
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GSTEN00018060G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00018060G001
Membrane trafficking [BR:
tng04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
GSTEN00018060G001
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
GSTEN00018060G001
RAVE complex
GSTEN00018060G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_RIG_1st
TPR_GEMI5
Motif
Other DBs
NCBI-ProteinID:
CAF99839
UniProt:
Q4SHP3
LinkDB
All DBs
Position
5
AA seq
3005 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTWNYCKGIPLRSHNNIGKFIVGTHQNLRGTPQ
AYGSGCDVVILASDFDCVQIIPGAQNGNIQVGCVECSHQLGRIAASYGNTVCIFEPLTTN
PNKRHKQLNYQWQKTGQFFLDAITYNLAWDPQGNRILAATERLQLWAPPLTDALIEEEDG
QLIEDRPHPVLNDWNCVWQCKTAASVHVAKWSPDGEYFATVGKDDCLLKVWYPTTGWRSA
VVVQDNADKKPPPVHFSFVYLAHPRSVTGMSWRKTSKYMPKGSVCNVLLTSCEDGVCRLW
SETLLPEDSLLGGQISENTQSFSSCLPGLAGNKDKIQHALESIHHLKHLRRGRRRSSALV
AHSELLPSQLGTQDAHTHRHIAHHANALCHFHISASINPNTDIPSALADSAVFNPDDGTG
GGGFVVHWLNNKDLSFTSSMDLFMLQLRKFSEQQLEQATEDALEPEGSPMKFDFDLDEMS
DKGSSEHGEEGEPGEQGSTKASSPGSSSSMPLPSMLLERKMETLIIEWNKSPDMLFTIHP
TDGSFLVWHVKYLDEFNQGIFRQVQVSFSTRIPVAFPTGDANSLSKNILMYACTLTEGGN
PGHEEEQRRTIQRISKSASASGSLGSLALTPSTKYPGISPAVMMVSKHVDGSLNQWAVTF
AECSAFSNVLTVSHKFRYCGHRFHLNDQACHTVLPLLLTSSHHNALLTPPSAPGSLEGEQ
LPIFLPKGLPRKQLRNAATRTFHDPNAIYSELILWRVDHIGPLSCTGGVSELARINSLHT
SAFSNVAWLPTLIPSSVLGTYCNSASACFVASDGKNLRLYQAVVDARKLLDELSDPETSK
LVGEVFNIVSQQSTARPGCIIELDVITNQCGTNTQLLHVFQEDFILGYKPQKEEIHMPTF
PYGEDYQSAPFSEKFFLVVIEKDLNRNSVLQMWHLHLKSVQACVDEQSPDYTFQSHLMVP
NQVVNADSSPETSPIRPLPRSASTANLQSASKLILSSKLVYSKRLDLPHGVEVTRATPSA
GLNTVISTSYCCRKKYMFIFITVFGTCCKWDSSCSYTGRLAVAFKKPRQGQLHGPAEDFS
MHVSIYECESTGGSEWVLEQTLHLDDFTRPTSTLDPRVSVDSNLFVYSRSDLYMSRDHSS
PNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQTSSKEGVAVITLPLGGSI
KQGIRSRWILLRSIDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWYQDKKPGV
GEEDNLLVDNAGGQTTGSFSVYEGRARSKSVFEGNTVVDEALRAPAGLQEGGLFEAAHSL
SPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHLSRTI
SVTGSTAKDTIVSGRDGGRDYTEINSIPPLPLYSLMLADMDTSYKAGEEAGKGTKVVDGE
RGQKSTEDQYSDLFQVQTVTTDDFVNFATDKPEKKSRVINLSQYGPTYFGPEHAQVLSSH
LMHSSLPGLTRLEQMFLVALADTVATTSAEVPSSTDQQYTGAEALDECGLRYLLAMRLHT
CLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQRGDPQWSELRAVGVGW
WIRNINTLRKMVEKLGKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFKN
NFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVLMEKMEDLQLAMIVARL
YEADFENSSTCQGLLNEKVLGCNRDGSSYHCSRLHPDPFLRSIAYWITKDYTRALDTLLE
RIPKEDDENPGEQVADISDVIVKSCNPVVFSFYNYLRTHPLIIRRHFANPDGTATTVGLT
AEKNSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKITKKCSSSSMSRASSKTN
LNSSKPLENGTHGGIDWGSSSAPGHSWGGNDSGAGFDWSQPVTKAEDDELKLDWGDDKDE
DDEDDDVDGLTMKTPETKDGGSESGGTKLQRENSQVRMCLKLSFKVDVIAEQLKFRACLK
ILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHKICNYKVEGKEEDSGFERFGERTT
SVDISDDALENLDVGAYERHQLERRRLQAKQQHFERRKAWLRKNQALLRVFLSYCSLHGA
KGGGVTSVRMELLFLLQESQQELTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLS
NHIRDILHTITLMEAPPHPDFMDDRRCVTATSYSSQTEANQFTGMVYQGLLLSERKRLRT
ESIEEHITPNSAPAQWPGVSSLISLLASAREEDQPRLSVLLCEAVVAVYLSLLIHGLGTH
GSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPELPPVPPAEDVDRYRRRFNMRMLVP
GRPVKESPATPPPVPTDRPTYREKFIPPELSMWDYFVAKPFLPLSDSNALCDSDESGAEE
DEDDDDAFLSDTQMTEHSDPNSYSWALIRLVMVKLAHHNIKNFLPLAGLDSTDLPVTSPL
SNAVIKTLENWEQLLLERINKFDGPPPNYINTYPTDLSAGGGPAILRHKAMLEPDNTPFK
TKNHQSFPARRLWHFLVKQDVLQETLIRYIFTKKRKQSEVEADLGYPGGKAKIIHKESDI
IMAFAINKANSNEIVLASTHDVQEVDVSTLVAVQPFTWIGDDFDKESRSSDDIDHRSSHT
NIAQASSVPFAPPQMSVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGA
QDGSVRMFEWKRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNP
KPYLSWQCHSKTCGDFAFITSSSLIATAGQSNDNRNVCLWDTLIPSSNTMVHAFPCHENG
ATVLQYAPKQQLLITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAYEDFFITGSA
EGNMKVWKLAGHGLMHSFSAEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVL
PDRYS
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctgacgggagccgtgaaccccggagactgctgctattcggtg
ggaagcgtcaatgacatccctttcacgtggaattactgcaagggaatccctttgcgcagc
cacaacaatattggaaaatttattgtaggcacccatcaaaatctgcgtggcacaccgcag
gcctacggctccggctgtgatgttgtgatcttggccagtgactttgactgtgtacagatc
atcccaggagctcagaatggaaacatccaggtgggctgtgtggagtgctcccaccagctc
ggcaggatcgccgcctcttacggaaacacagtctgcatctttgaacctctgactaccaac
ccaaacaaacgccacaagcaacttaactatcagtggcaaaagacaggacagttcttcctt
gatgccatcacgtacaacctggcctgggacccacaaggaaaccgtatcctagcagcaact
gagcggcttcagctgtgggctccaccactgacagatgctctgatagaggaggaggatggg
cagctgattgaggacaggccccaccctgtcctcaatgactggaactgcgtgtggcaatgc
aaaactgctgcatctgtgcacgttgccaagtggtcacctgatggcgagtactttgcaaca
gttggaaaggatgattgtttacttaaagtgtggtatcccaccacgggctggcgttcggca
gtggtggtccaggataacgcagataaaaagcctcctccagtccacttctcctttgtttac
ctggcccatcctcgctcagtcactggtatgtcatggaggaagaccagcaagtacatgccc
aagggttcagtgtgcaatgtactgctgacttcctgtgaagatggcgtgtgtaggctgtgg
tcagagactctgctgccagaagacagcctgcttggaggacagatctctgagaacacacag
tcgtttagttcctgcctaccagggctggcaggcaataaagacaagatccagcatgctttg
gagtcgattcaccatctgaaacatctgcgccggggccgtcggcggtcctctgctctggtg
gcacatagtgagctgttgccctctcagcttggcacacaggacgcacacactcaccgccac
attgctcatcatgcaaacgccctgtgccactttcacatttccgccagtatcaatccaaat
acagacattccatcagcgttagctgactctgcagtgtttaatccagatgatggtactggt
ggtggcggctttgtggttcactggctcaataataaagatcttagcttcacttcctcaatg
gatctctttatgctgcagctccgtaagttctctgagcagcagctagaacaggcaactgag
gatgctctggaacctgaagggtcacctatgaagtttgactttgatctggatgagatgtct
gacaaaggctcctctgagcatggcgaggagggagagccaggagagcagggaagcaccaag
gcgtcctcccctgggtccagctccagcatgcctttgccctctatgcttttagagcggaag
atggaaacactgatcattgagtggaacaaaagcccagacatgctgttcaccatccacccc
actgatggatccttcttggtctggcatgtgaagtacttggatgaatttaaccaaggcatc
ttcagacaggttcaggtgtccttttcgactcgtatcccagtggcgtttcctacaggcgat
gctaactcattgagcaaaaacattttaatgtatgcctgcacattgacggaaggtgggaat
cctgggcatgaagaagaacaacgaagaacgatccagcgcatctccaagtctgcttcagct
tcgggcagtctgggttcactggccttgaccccttccaccaaataccctggcataagtcca
gctgttatgatggtgtccaaacatgttgatggatctctcaaccagtgggcagtgacattt
gcagaatgttccgctttctccaacgtgttaactgtgtcacacaagttccgttactgtggc
caccgttttcatttgaatgaccaagcctgccacacagtgctgcccctgctgctgacctcc
tcacaccataacgctctgctcacccctccctccgctcctggcagcctagaaggagagcag
ctgcctattttcttaccgaaaggacttcccaggaagcagcttcgtaatgccgctacaagg
acattccatgaccctaatgccatctacagtgagctgatcttgtggagagtagatcacatt
ggacctctgtcttgcactggaggggtgtctgaattggctcgcatcaactctcttcacacc
tctgcttttagcaatgtcgcttggctaccgacactcattcccagctctgtacttggaact
tactgtaacagtgccagtgcatgctttgtggcgtcagatggtaaaaacctgcgtctctat
caagctgtggtggatgccagaaaactactagatgaactgtcagatcctgaaacatctaaa
ctggtgggagaggtgttcaacatagtcagtcagcaatccactgccagacccggatgtatc
atagagttggacgtcatcacaaaccagtgtggaaccaatactcagctgctgcatgtgttc
caagaggacttcattctaggttacaaaccccagaaggaagagatccatatgccaaccttt
ccatatggtgaagattaccagtctgccccgttctctgagaagttcttcctggtggtgata
gaaaaggatctgaacaggaactctgtcctgcagatgtggcatctgcatctcaagtctgtg
caagcctgtgttgatgagcaaagtccagattacaccttccaaagccatctaatggttcca
aaccaagttgtgaatgcggactcatctccagagacttctcctatcagacccctaccacgt
tctgcctcgacagccaatttgcaatcagcaagcaaactcattctgagctccaaactcgtg
tacagcaaacgtcttgacttgccccatggggtagaggttaccagggccaccccctctgca
ggtttgaatacagttatttccacatcatattgctgccgcaagaaatacatgtttattttt
ataacagtatttggaacctgctgtaaatgggattcctcctgctcctatactggcagactt
gctgtggcttttaaaaagcctcgacaaggacagctacatggtcctgcagaggacttctcc
atgcacgtgtccatctatgagtgtgagtctaccgggggctccgaatgggttttagagcaa
accctccaccttgatgacttcaccaggcccacatctaccttagatccaagagtcagcgtg
gactccaacctctttgtatacagcaggtctgatttatacatgagtagagaccatagctcc
cccaacattaaacactacgtccacttagactggctgtcaaaagaggatggatctcacatc
ctcactgtgggagttggctccaacattcttatgtatggccgtatctcaggcatggtcaac
gagcagactagcagcaaggaaggggtggccgtcatcactcttcctttaggtggcagcatt
aaacagggcatccggtcacgctggatcctgctccgatccatcgaccttctgtcctctgtg
gatggcacaccttctttacctgtctccttgtcctgggtcagggatggcatcctggtggtg
ggcatggattgtgaaatgcatgtatatgcccagtggtaccaagacaagaagcctggtgtt
ggagaggaggataaccttcttgtagacaatgccggaggtcaaaccacaggttccttctca
gtgtatgaggggagagccaggtctaagagtgtgtttgagggaaacacagttgtggatgag
gctttgcgcgctcctgcaggccttcaggaaggaggactatttgaggccgctcactcactg
tcaccaactctaccccagtaccatcccacccagctgctggaactcatggacctgggcaag
gttcgccgagccaaggctatcctcgctcacctggtgaaatgtattgctggcgaagtggct
gtggtgagggatgtggaggcaggtgagggtggagctagaagacacctgtccaggacaatc
agcgtgactggcagcactgcaaaggacaccattgtttccggtcgtgatggaggcagggac
tatacagaaatcaactccatacctcccttaccactatattctctcatgttggcggacatg
gacacctcatacaaagcgggtgaagaggctggtaaaggaacaaaggtggtagatggtgaa
cgaggacaaaagtctacagaagaccagtattctgacctctttcaggtccaaacagttacc
acagatgattttgtgaactttgcaactgacaaaccagagaagaagtcaagagttattaac
ctatctcaatatggccccacctattttggaccagagcacgctcaggtattatctagtcac
cttatgcactccagtttaccaggcctgaccagattagagcagatgttcttggtggcctta
gctgataccgtggctaccacaagtgctgaggtccccagctccactgatcagcagtacacc
ggtgcagaggctcttgatgagtgtgggttgaggtacctgctggccatgcgtcttcatacc
tgcctgctcacttctctgcccccattgtaccgcatgcagctgctccaccagggcctatca
acatgccattttgcatgggccttccactcagaggcagaggaggagctgctaaacatgatc
ccagccatgcagcgcggtgacccacagtggtcggagctcagagctgttggcgtgggctgg
tggatacgcaacatcaacacactgcggaaaatggtggagaagttgggtaaagctgctttt
cagagacataacgatcccttagatgctgctttgttctacttggccatgaagaagaaagct
gtcctgtgggggcttttcaggtctcagcatgatgagaagatgactcaattcttcaaaaac
aacttcagtgaagatcgatggaggaaggcggctttaaaaaatgccttttccctgctggga
aaacaacgttttgaacaatctgccgctttcttcctgttggctggatcgctcaaagatgcc
attgaggtattgatggagaagatggaggatctccagctcgccatgatagtagcaaggctg
tatgaggctgattttgagaattcatcaacctgccaaggcctccttaatgagaaggtcctg
ggctgtaacagagatggaagcagttaccactgctccagactgcatcctgaccccttcctt
cgcagcatagcctactggatcacaaaggattacacccgagccttggacacactgttagag
cgaattcctaaagaggatgatgaaaatcctggtgagcaggttgcagacatttcagatgtg
atagtgaaatcttgcaacccagtggtgttcagtttctataactacttgaggacacatcct
ttaatcatccgtcgtcattttgctaatccagatggcacagcaacaactgtaggcctcact
gctgagaagaacagtgcagatgagatcaatctaatagagcgcaaactgttcttcaccact
gccaatgcacacttcaaggtgggctgcccagttctggctttggaagtgctttccaaaatt
cccaagataaccaaaaaatgtagctcctcatctatgagcagagcatcatctaaaactaac
ttgaattcaagcaaacctctggaaaatggcacccatggaggcatcgactggggctcctca
tcagcccccggccattcctggggaggaaatgacagtggggctgggtttgactggagccag
cctgtaaccaaagcagaagatgatgagctgaaactggactggggagatgataaggatgaa
gatgatgaggatgacgacgttgatggtctcactatgaagacaccagagacgaaagatgga
ggctcagaaagtggtggcaccaaactgcagagagaaaactcacaggtcagaatgtgtttg
aagttgagtttcaaggtggacgtgatcgcagagcagctgaagtttcgcgcttgtctgaaa
atcctaatgacagagctgcgcacattggccacgggctttgaagtagatggagggaaactg
agatttcagctgtacagttggctggaaaaagagattgcagccatgcacaagatctgcaat
tacaaggtggagggaaaggaagaggattcgggattcgagcgttttggagagcgtacaaca
tcggtagacatatcagatgatgccctggagaatttagatgttggcgcctacgagcgacac
cagctagagcgtcggcggcttcaagccaagcagcagcattttgaaaggcgcaaagcatgg
ctgaggaagaaccaggccctgctgagagtgtttctgtcctactgtagcctccatggggcc
aagggtggaggggtcacctctgttcgcatggagcttctgttcctgctacaggagagtcag
caggagcttacagtcaaacagttgcagtcccctctgcctctgcccactacactgcctctg
ctgtctgcttgcattgcccccaccaagaccgtcatagctaatcctgttcttcacctcagc
aaccacattcgtgacatcctccacaccatcactctgatggaggccccaccacatcctgac
ttcatggatgatcggcgttgtgtgacagccactagctacagcagccagacagaagctaac
cagtttacagggatggtgtaccagggtctgctgctcagcgagagaaaacgactacgcaca
gaaagcattgaagaacatataactcctaattctgctcctgcacaatggccaggtgtgtca
tccctgatctctttgttggcttctgccagagaggaggaccagccaaggctcagcgtgctt
ttgtgtgaagctgtcgtggctgtttatctctccctgctcattcatggtctgggcacacac
ggcagcaatgaactcttccgcctggcagcacatcctctcaacaaccgcatgtgggctgct
gtttttgggggaggggccaaagtcattattaagccaaagaggcctgagcttccaccagtt
ccgccagcagaggacgtggatcgatacagacgtaggttcaacatgcggatgctggtgcct
ggacgtccagtaaaggaaagcccggccaccccgcctcctgttcccacagacaggcccaca
tacagggagaagtttatcccaccagagctgagcatgtgggattactttgtggccaaaccc
ttcctgcccctgtcagacagcaacgctctgtgcgattcagacgagagtggtgcagaggag
gatgaagacgacgatgacgcctttctttctgacacacagatgacagagcactctgatccc
aactcttacagctgggctttgatccgcctggtcatggtgaaactggctcaccacaacatc
aagaatttcctccctcttgcaggccttgactctacagaccttccagtaacatctcccctc
agtaatgccgtgataaagactttggagaactgggagcagcttctgctggaacgtattaac
aaatttgacggacctccaccaaactatatcaatacatatcccactgacctgagcgcaggc
ggaggccctgccattctgcgccacaaggccatgctggagccagacaacacacccttcaag
acaaagaaccatcagtccttcccagctcgacgtctttggcattttctggtcaaacaggat
gttctccaagagactttgatacgttacatttttaccaagaagagaaagcagagtgaggtg
gaggcagatctgggttatccagggggcaaagctaaaatcattcacaaggagtctgatata
attatggcatttgctataaataaggctaactctaatgaaatagttctggcctccactcat
gatgtccaagaggtggacgtgtccaccctggtagccgtccagcccttcacctggatagga
gacgactttgataaggagtctcgcagttctgatgacatcgaccatcgatcttctcataca
aacatcgctcaggccagctctgttccctttgccccaccgcagatgtcagtctctgcatcc
atgccttggctgggcagcggacaaaccagcatgggtgccagtgtgattatgaaaaggaat
ctcaacaacgtgaaaagaatgacatctcatcccatctaccagtattatatgacgggggcg
caggacggcagcgtcaggatgtttgaatggaagagacctcagcagctcatttgcttcaga
caggccggcaacgccagagtcacccgtctgtatttcaactcccagggcaataagtgtgga
gttgctgatggcgagggcttcctcagtttgtggcaggtcaaccagacatcatccaaccct
aaaccttatctgagctggcagtgccactctaaaacctgcggcgactttgctttcatcaca
tcctccagcctcatcgccacagccggacagtccaatgacaacagaaatgtttgtctgtgg
gataccctaattccatccagtaacaccatggttcacgcattcccctgccacgagaatggg
gccactgtgctgcagtacgctcctaaacagcagctgctgatcactggtggcagaaagggc
tttgtgtgcgtgtttgacatccgccagaggcagctgctgcacactttccaggcccatgat
tcggccatcaaagccctggcgttggatgcctacgaggacttcttcatcactggctctgca
gagggcaacatgaaggtgtggaaattggccggccacgggctaatgcactctttcagtgcc
gaacacgcaaagcagtctattttccgcaacattggcgccggtgtcatgcaggtggagacc
cggcccggtaaccgcatcttcacctgcggtgcggacggtaccttgaagatgagggtactc
cccgaccgttacagt
DBGET
integrated database retrieval system
