Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018068G001
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Entry
GSTEN00018068G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06842
semaphorin 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
Motif
Other DBs
NCBI-ProteinID:
CAF99841
UniProt:
Q4SHP1
LinkDB
All DBs
Position
5
AA seq
1016 aa
AA seq
DB search
MGQRAALLLSELLLLLTASCTLLAVSFPEDSVPLDVVDAHFSRRYPVFRGRPSANESQHR
LDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRDMCAVKGKHRD
ECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDSKQTNVA
LFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYFF
YREIAVEQSSLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDV
LQSITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTQDSVWTP
FPEEKLPKPRPGSCAGHSPAASFKSSIEFPDDTLQFIKSHPLMDTAVPSLGDEPWFTKTR
VRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTPSVSLDDSLLLEEIDVFNRAK
CLSNREDDKRVLSLHVDKEAHSLYVAFSSCVIRIPLSRCERHSSCHNPSSGPDPDHYGSG
FVLQDDPATSNTLNSIPGGQEGVWDIQAGETNQMVHMNILITCVFAAFLMGALLAGLIVF
CYRDSVLRKPRHVHKDTESAPSCSDSTGSFVKLNGLFDSPVKEYQTNIDTPKLFTNLLTN
SKDLNTPNSDTKTMILRDSCQPPELAALPTPESTPVLQQKGLQPITNQWERAQGKVSGPR
KESNSSAKSPQFLPAPALLNPKSHQGHIALGHSHIPSAVVLPNATHELSNMDGGSDTLPH
SSEKRLKNPDSKGSRKDPKRSVDARNTLNDLLKHLNDSVANPKAILQEEPGPRPRQHLTL
EPMDELTEIPPVVPSREASLYSPSSSLPRHSPTKRVDVPLPTTPTTPTGSLSMGGTLERQ
RGGYQLHRSASHRHSLSTSQNGVTMGVSVSRQHSMNRGGCMPPTPPSRIDSHSGVMGPGM
HSPHSSISRQNSYNGHCSLPRTGLKRTPSLKPDVPPKPNGFSPQTSQMRVVNKYNY
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagcggcgcttctgctcagtgagctgctgctgctgctgacagcctcatgc
acgctcctcgcagtcagcttccccgaggacagcgtacctctcgacgttgttgacgcccac
ttttcacggcgctaccctgtgttcagaggccggccctctgcaaacgagtcgcagcatcgc
cttgactttcagctgatgaccaagatacaggacacactgttcattgctggcagagatcag
gtgtacctcgtcagtctgagggaatcctacaggaatgaaatcataccttaccggaagctt
acatggcgatcgggccaggctgacagagacatgtgtgccgtgaagggaaaacaccgggac
gagtgccacaacttcatcaaagtgctggttcccagaaacgatgacttggtgtttatctgc
ggtaccaacggcttcaaccccatgtgcagatactataggctggataacctcgagtttgac
ggcgaggagatcagtggactggcaagatgcccgtttgactccaagcaaaccaacgttgcc
ctttttgcggaggggaagctgtattctgcaactgtagccgacttccaagccagcgattct
gtcatctatcgcagcatgggtgatggatcagcgctgaggaccatcaagtatgactccaag
tggctgaaagaacctcatttcctgcacgccgcagagtatgggaattatgtctactttttc
taccgagagattgcggtggagcagagcagtctgggcaaggtcgtgtattcccgcgtggca
cggatttgcaagaatgacgtcggcggatcacagcgggtgctggagaagcactggacgtct
tttgtgaaggccagactgaattgttcggtgccgggagagtcgttcttctactttgacgtg
cttcagtccatcactgacatcatcaacattaacggggttccctcggtagtgggcgttttc
accacgcagatgaacagtattccaggatcagcggtctgtgctttctccatggctgacata
gaaaaagtgttctggggtcggtttaaagagcagaagactcaggactcagtgtggactccg
tttccagaggagaagctgcccaagcctcgacctggttcctgtgcaggtcacagtccagct
gcttcctttaagagctccatcgagttcccggatgacaccctgcagtttatcaagtcccac
cccctcatggacacagctgtgccttcgctgggagacgagccctggttcaccaagacccgc
gtcaggtacagactgacggcgctggctgtggacaatgaagccgggccccacaagaactac
accgtggtgtttatcggggcagagtcaggggtcgtcctcaaggttttagccaagaccccc
tccgtgtccctggatgacagcctgcttctggaggagatcgatgtcttcaacagggcaaag
tgtctgtctaaccgggaggacgacaagcgtgtcctctcgctgcatgtggacaaagaagcg
cacagcctctatgtggctttttcgagctgcgtcatccgcattcccctgagccgctgtgag
cggcattcctcctgccacaaccccagctctggacctgatccagatcactacggctcaggc
tttgtgttgcaggatgatccagccacctccaacactttaaactctattccagggggccaa
gagggtgtgtgggatatccaagcaggggagaccaaccagatggtccacatgaacattctc
atcacctgcgtgtttgctgcatttctgatgggtgctctgctagctggactgattgttttc
tgctatcgtgactcggtcttgcgtaagccaagacacgtgcacaaagatactgagtcggct
ccatcctgctccgactccactggcagctttgttaagctcaatggcctctttgacagtccc
gtaaaggagtaccaaaccaacattgatactcccaagctcttcaccaatctgctgaccaac
agcaaagacctgaacacaccaaacagcgacaccaagaccatgatcctgcgggacagctgt
cagccccctgagctagctgcactgccaacacccgaatcgactcctgtgctccagcagaag
gggctgcagcccatcacaaaccagtgggagcgagctcaaggaaaagtcagtggacctcgt
aaagagtccaactcatcagccaagagtcctcagttcctgcctgctcctgctcttctaaac
ccaaagtcccaccaaggtcacattgccttgggacactcccacatccccagcgcagttgtt
ctacccaatgcgacacatgaactttccaacatggacggtggaagtgacactctaccacat
tcatctgaaaagaggctgaagaatccagattctaagggaagcagaaaagacccaaagagg
tctgtggatgccagaaacacacttaatgatcttttaaaacacctcaatgactctgtggcc
aatccaaaggccatacttcaagaagaaccagggccccgcccaaggcaacatctgacacta
gagcccatggatgagctcactgaaataccccctgtggtgcccagccgtgaggcttccctc
tattctccctcatcctccttgcccaggcacagccccacgaagagggtggatgtgcctctg
cccactactcccacaacccccacaggaagcttgagcatggggggcaccctggagaggcaa
agaggggggtatcaactccatcggagtgcatctcacaggcattcattatccacttcacaa
aatggagtaactatgggggtgtctgtgtctcgccaacacagtatgaacagagggggatgc
atgcccccaacacccccctccagaatcgactctcacagcggagtgatggggccaggaatg
cactcaccccactcctctatatcccgacaaaacagctacaatgggcactgttcgctgcct
cgcacagggcttaaacggaccccttcgctaaagccagatgtgccccctaagcccaacggc
ttttcaccacagacttcgcagatgcgtgtcgtcaataagtacaattattaa
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