Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018133G001
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Entry
GSTEN00018133G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10610
DNA damage-binding protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00018133G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00018133G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00018133G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00018133G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
GSTEN00018133G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSTEN00018133G001
TCR (transcription coupled repair) factors
Cul4-CSA complex
GSTEN00018133G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-ProteinID:
CAF99894
UniProt:
Q4SHI8
LinkDB
All DBs
Position
5
AA seq
953 aa
AA seq
DB search
XKMIPLDGDNREWKAYNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQGRHVKTYEVSLAD
KEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIV
CHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDN
GVVFVGSRLGDSQLVKVRVTHSLSELNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLERQ
GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFV
GQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEW
REPQGRNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVACLDITPLGEAG
AESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGA
LFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSN
VNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVS
QCFGVLSSRMEIQDVSGTTSPVRPSASTQALSSSVSSSKLFPSSTSPHESSFGEEVEVHN
LLVVDQHTFEVLHAHQFLPSEYALSLVSCRLGKDPSLQTIPNECVFQVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGET
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKTTWRSFHTERKTEQATG
FIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
nncaaaatgatcccattggacggggacaaccgtgaatggaaggcgtataacatcagactg
gaggagctgcaggttatcgacgttcatttcctctacggctgtcaggctccaactgtctgc
ttcatctaccaggacccacaggggcgccatgtgaagacctatgaggtttctctggcagac
aaagagttcaacaaaggtccctggaagcaggagaatgtggaggctgaggcgtccatggtc
atcccagtgccagagccttttgggggcgctattatcataggacaggagtccatcacttac
cacaatggagacaaatacttggccattgctccacctaccatcaagcaaagcaccattgtt
tgtcacaaccgagtcgacccaaatggctcgcgatacctgctgggggacatggaggggcgc
ctcttcatgttgcttctggagaaggaggagctaatggatggcacagtggcgctcaaagac
ttgcatgtggagctgcttggagagacttctattgccgagtgtttgacctacttggacaac
ggcgtagtcttcgttggctccagactgggagactcccaacttgttaaggtgagagtaaca
cacagcttgtctgagctcaacgtcgacagcaacgaccagggctcgtttgtgaccgtgatg
gagacgttcaccaatctcggccccattgtggacatgtgtgttgtggatctggagcggcag
ggccaaggccagctggtgacgtgttcaggtgcgtttaaggaaggctccctacggatcatt
cgcaacggcattgggattcacgagcatgccagcattgacctccctggaatcaaaggtttg
tggccgctccgttctgaagcaggcagagagactgatgacatgctagtcctgtcttttgtg
ggacagacacgagtattgatgctgagtggcgaagaggttgaggagactgaactgccagga
tttgtggataaccagcagacgttttactgtggaaacgtggctcacaatcaactcattcaa
ataacatcaggctcggtgcgcttggtgctccaggacagcaaggctttagtgagtgaatgg
agggagccgcaggggaggaacatcagcgtggcagcctgtaatcacactcaggtggtgctg
gccgtgggccgagccctctactacctgcagatcctggcgggagagctcaaacagataagt
accacagagatggagcatgaagtggcctgtctggacatcacacctctgggagaagctggt
gctgagtcacctctctgcgctgtgggactgtggactgacatctcagcccgtgtcctcaaa
ctcccctgcttcacagccctgcacaaggaaatgctgggtggagagatcatccctcgctcg
atcctgatgaccactttcgaaggcagctactatctgctctgtgctctcggagatggcgcg
ctcttctacttcggtctggacctgcagactggtgccctcagcgagcgtaagaaggtgacg
ctgggaacccagcccactgtgctcaggaccttcagatctctttcaacctcaaatgtcttt
gcctgctctgaccgaccaactgtcatctactcctccaatcacaagctggtcttctccaac
gtcaacttgaaggaggtcaactacatgtgtccactcaactctgagggctatcctgacagt
ctggctctggccaacaacagcaccctgaccatcggcaccatagacgagattcagaaactc
catattcgcaccgtccccctctacgagtctcccaggcgtatctgctaccaggaggtttct
cagtgtttcggggttttatccagcaggatggaaattcaggatgtgagtggcaccacatca
cctgttcgtcccagcgcgagcacccaggctctttccagcagcgtgagctccagcaagctg
ttccccagcagtacttcgccacatgaatcctcctttggtgaagaggtggaggttcacaat
ttgctggttgtggaccagcacacctttgaagttcttcacgctcatcagttcctccccagt
gagtacgccctgagcttggtgtcatgtcgcctggggaaggatccctcgctacaaactatt
cctaatgagtgtgtcttccaggtgcgtctgtacgagtggacggcagagaaggagctgagg
accgagtgcaaccactataacaacatcatggctctgtacctgaagaccaaaggggatttc
atcctggtgggagacctaatgaggtctgtcctgctgctggcgtacaaacccatggagggc
aactttgaagagattgcacgtgacttcaaccctaactggatgagcgccatcgaaatcttg
gatgatgacaacttcttgggggcagagaacgctttcaatctcttcgtctgccagaaggac
agcgccgccaccacagacgaggagcggcagcatctgcaggaggtgggggtgttccacctc
ggtgagtttgtcaatgtcttctgccacggctcgctggtgctgcagaatctcggtgagacc
tcgacacccactcagggctccgtgctcttcggcaccgttaacggcatgattggtctggtg
acgtccctgtctgaaggttggtacagcctcctcctggatctgcagaaccgcctcaacaag
gtcatcaagaccacctggaggtccttccacacagagcgcaagacggagcaggccaccggg
ttcatcgacggggatctaattgagagcttcctggacctcggccgagccaagatgcaggag
gtggtcagcaccctacagatcgatgatggcagcggcatgaagcgtgaagccacagtggac
gaggttattaagatcgtggaggagctgacaaggatccactaa
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integrated database retrieval system
