Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018147G001
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Entry
GSTEN00018147G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06766
neogenin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04350
TGF-beta signaling pathway
tng04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00018147G001
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
GSTEN00018147G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00018147G001
Cell adhesion molecules [BR:
tng04515
]
Immunoglobulin superfamily
DCC/UNC5 family
GSTEN00018147G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
Ig_Rha78A_N
Tissue_fac
C2-set_2
fn3_SORL1
EphA2_TM
Motif
Other DBs
NCBI-ProteinID:
CAF99906
UniProt:
Q4SHH6
LinkDB
All DBs
Position
5
AA seq
1515 aa
AA seq
DB search
PGSAAQPFSPFWLTVEPQDTLAFRGTSAQLNCSAHSDAATPARVEWKKDGTFMSPASDER
RRILPDGSLLFTHVVHSKHNKPDEGTYQCVATIENLGSISSRTARLSVAGTPRFTSQPTA
ATVHQGSSHVMPCEVNADLAPFARWEKDRQPLELGARLIQLPSGALVISNASEGDAGLYR
CLLENVGSSKSSDEAQLHVVPEPGQERKLEFLLEPVSVTKVLGATALLPCVVTGYPAPHV
RWMLGDKLVEESEGRVEVLGGASLQISNLTEEDAGVYTCMADSANGTIEAQAQLSVQVGL
VGNIQPVGVPPQFVRRPANIYAHESMDIVFECEVSGSPAPSVKWVKNGDAVIPSDYFKIV
KEHNLQVLGLVKSDEGFYQCLAENEAGNIQSSAQLIILDHGSGGVANTAGPTPSAPRDLV
ASLVSTRFIKLTWRPPAEPHGDELTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDT
KYRFRVLAHNSNGQGESSAAARVATQCRTVLQVPGPAPNLQAVSNTPTSVSLSWEKTPDR
KRRHRHLQAVLRRQKRRQRAATKAPVDEPVCPLVQDVDVDAQSHTVTGLKKNTEYSFRVV
ANNKHGPGVSTEDVTVRTLSDGRWSNETTFGWIQQANVCSPSSTVPSAPPQNLTLEVQNS
KSIMLRWQPPPPSSQNGEIINYKIKYRKGSRRSETSDSTSGSQLFKLISGLERGTEYSFR
VSAMTVNGTGPATDWTTAETFESDLDGRDAAPDTVILESRVPNQPSSLHVRPLVNSIVVS
WTPPEDQDIVVRGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNMGE
GIPVYESAITRQQSADPIDPDVDLYELFHGPYTPVPDPSPMMPPVGVQASVLSHDTIKVS
WADNTLHKSQKITDNRFYTVRWKTNIPANTKVKMANTTSLNYMVTGLKPNTLYEFSVMLT
RGRRTSTWSMTAQGTTFEAVPSSSPKDVTVVSKENKPRTIIINWQPPSEANGKITGYIIY
YSTDVNAEDHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPK
RPSGNQHPQDPPAVGETPSGSERSQPGDAHGSAVCAPRGQKCFRSSPVSLLPSGKTGASE
SHILVIVIIISVGAFTIILVVVGAFLCTRRTTSHQKKKRAASKSSNGSHKYKGNAKDLKP
PDLWIHHERLELKPMDKSPEPNPVMTETPIPRTSQDMAPADSGLDSNPHLQQRRNSYRGH
ESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHMGSLASPPRSYF
YHQGSGHPRPHACATPITHLDRVESTESVRNTPSSEPLPPAAASSQASCPSEIMVDPEGS
YHGSTTTEEEPSYSSNLPPHRPAHPHAHAHPLKSFAVPAIPAGSHPSYESPALPSTPLLA
QSGPPTHPHIVKTASIGTLGRTRTPMLVSVPNAPDVPETSKMLEDVDNSYEPDELTEEMA
HLEGLMKDLNAITTA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
ccaggctcagcggcgcagcccttcagccccttctggttgacggtggagccccaggacacg
ctggccttccggggaacctcggcccagctcaactgctcggcgcacagcgacgcggccacg
ccggcgcgcgtggagtggaagaaggacggcaccttcatgagcccggcgtcggacgagcgg
cggcgcatccttcccgatggctcgctgctcttcacccacgtggtccactccaagcacaac
aagcccgacgaggggacctaccagtgcgtcgccaccatcgagaacctgggctccatatcc
agccgcacggcacgcctttcggtagcaggcacgccccggttcaccagccagcccacggcg
gccaccgtgcaccaggggagcagccacgtgatgccctgcgaggtcaacgccgatctggcc
ccattcgcccgctgggagaaggaccgccagccgctggagctgggcgccaggctgatccaa
ctccccagcggcgctctggtgatcagcaacgcctccgagggcgacgccggcctctaccgc
tgcctgctggagaacgtcggctcgtcaaagtccagcgacgaagcgcagctccacgtcgtg
cctgaaccaggtcaagaacggaagctggagttcctcctggagcccgtgtccgtcaccaag
gtgctgggcgccacggcgctgctgccctgcgtggtcacgggctaccctgcgccacacgtc
cgctggatgctaggagacaagttggtcgaagaaagcgagggccgtgtggaggtgctggga
ggagccagtctccagatctccaacctgactgaggaggacgccggcgtctacacctgcatg
gccgacagcgctaacggcaccatcgaggcgcaggcccaactcagcgtccaagtcggcctg
gttggaaacattcagcctgtcggagttcctccccagtttgtcaggcggcccgccaacatt
tatgcccacgagtccatggacatcgtcttcgagtgcgaggtctcggggtcgccggctccc
tcggtcaagtgggtcaagaacggagacgccgtaatccccagcgactacttcaagattgtt
aaggagcacaacctgcaggtcctgggcctggtcaagtccgacgagggtttctaccagtgt
ctggccgaaaacgaggcaggcaacatccagtccagcgctcagctgatcatcctggatcac
ggctccggaggcgtagccaacacagcggggcccaccccctccgcccccagggacctggtg
gcctcgctggtctccacccgcttcatcaagctgacctggcggccgccggcggagcctcac
ggggacgagttaacctactctgtgttctacagccaggagggcaccagcagagagcgagtg
gtgaacaccagccggcccggagagatgcaggtcaccatccagaacctgatgcccgacacc
aaataccgcttcagggtcctggcccacaacagcaacggccagggggagagctcggcggca
gcgagggtggccacccagtgccgaacggtactccaggtgccgggcccggccccgaacctg
caggctgtgtccaacacgcccacctcggtgtccctgagctgggaaaaaacccctgaccgg
aaacggagacatcgtcacctacaagctgtactacgcagacaaaagcgtcggcagcgagca
gccacgaaggcacccgttgatgaacctgtttgtcccctcgtccaggacgtggacgtggac
gctcagtcgcacaccgtgaccggcctgaagaagaacacagaatacagcttccgtgttgtg
gccaacaacaagcacggccccggcgtctccacggaggacgtcacagtccgcacgctgtct
gatggtcggtggagcaacgaaacgacgtttggttggatccaacaagctaacgtctgttct
ccttcctccacagtgcccagcgctcctcctcagaacctcacgctggaggtccagaactca
aagagcatcatgctccggtggcagcccccacccccgagcagccagaacggagagatcatc
aactacaagatcaaataccggaaaggatcacggaggagcgaaaccagcgactccacctcc
ggcagccagcttttcaagctcatcagcggtctggaacgtgggacagagtactccttccgg
gtctcggccatgacggtgaacggcacgggcccggccaccgactggaccacggcggagacc
ttcgagagcgacctggacggtagagatgctgccccagacaccgtcatcctcgagtcccgc
gtgcccaaccagcccagctccctgcacgtgcgcccgctggtcaacagcatcgtggtgagc
tggacgcctccggaggaccaggacatcgtggtgcgcggctacaccatcggctacggcatc
ggcagtccccacgcccagaccatcaaagtggactacaagcagcgctactacaccatcgag
aacctggatcccagctcccactatgtcatcacgctgaaggccttcaacaacatgggcgag
gggattcccgtgtacgagagcgccatcaccaggcagcagtcggcagaccccatagaccct
gacgttgacctctacgaactctttcatggtccatacaccccagtaccagacccctccccc
atgatgccacccgtgggtgtgcaggcctccgtgctgagccacgacaccatcaaggtgagc
tgggccgacaacactctgcacaagagccagaagatcaccgacaaccgcttctacaccgtc
cgctggaagaccaacatccctgccaacaccaaagtgaagatggccaacaccaccagcctg
aactacatggtgacgggtctgaagcccaacacgctctacgagttctctgtcatgttgacc
agaggccgccgcaccagcacctggagcatgacggcgcagggaaccaccttcgaggccgtc
cccagctcctcgcccaaagacgtgacggtggtgagcaaggagaacaagcctcgcaccatc
atcatcaactggcagccgccctccgaggccaacgggaagatcacgggctacatcatctac
tacagcaccgacgtcaacgccgaggatcacgactgggtgatcgagccggtggtgggcaac
cggctgacccaccagatccaggagctgacgctggacaccacctactacttcaagatccag
gcgcgcaactccaagggcatggggcccatgtcggaggccgtgcacttccgcacccccaag
agaccttctgggaaccagcacccccaggaccctccggccgtcggtgagacgccttcaggc
tctgagcggtcgcagccaggagatgcacacggctcagctgtttgtgccccacggggacag
aaatgcttccgctctagcccagtctctctcctcccctcagggaaaaccggcgccagcgag
agccacatcctggtcatcgtcatcatcatctcggtgggggccttcaccatcattctggtg
gtggtgggggccttcctgtgcacgcggcgcaccacgtcccatcagaagaaaaaacgcgcc
gcctccaagtcgtccaacggctcccacaagtacaaaggaaacgccaaagacctgaagcct
ccggatctgtggatccaccacgagaggctggagctcaagcccatggacaagtctccggag
cccaacccggtcatgacggaaacccccatcccgcggacctcgcaggacatggcgccggcg
gacagcggcctggacagcaacccccacctgcagcagaggcgcaactcctaccgcggccac
gagtcagaggacagcatgtctacgctagcaggccggcgggggatgaggcctaaaatgatg
atgccttttgacgcgcagccgccgcagcctgtgattagcgctcaccccatccattctctc
gataaccatcaccaccattatcacatgggcagcctggcctcgccaccacgcagctacttc
taccaccagggcagtggccacccacgccctcacgcctgcgccacccccatcacccacctg
gacagggtggagtccacagaatcggtgaggaacacccccagttccgagcccctacctccg
gccgccgcctcctcccaggcctcctgcccctcggagatcatggttgaccccgagggcagc
taccacggctccaccaccaccgaggaggaacccagctactccagcaacctgccgccccac
cgccccgcccacccgcacgcccacgcccacccactcaagagtttcgccgttcccgccatc
ccggccggcagccatccgtcgtacgagtcgccggcgctgccgagcacgccgttgctggct
cagagcgggcctcccacccacccccacatcgtgaaaacggcctccatcggaacgctggga
cggacgcggacaccgatgctggtctccgtgcccaacgctcccgacgttccggagaccagc
aagatgctggaagacgtcgacaacagctacgagccggacgagctgaccgaggagatggcc
cacctggagggcctgatgaaggacctgaacgccatcaccacagcg
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