Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018202G001
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Entry
GSTEN00018202G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07523
netrin-G1 ligand
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
GSTEN00018202G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00018202G001
Cell adhesion molecules [BR:
tng04515
]
Immunoglobulin superfamily
NGL family
GSTEN00018202G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-ProteinID:
CAF99945
UniProt:
Q4SHD7
LinkDB
All DBs
Position
5
AA seq
618 aa
AA seq
DB search
MRGPRLKGALSNPLLVLLLALQILVVAGLVRAQTCPSVCSCSNQFSKVICTRRSLRDVPD
GISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLASLNTLELF
DNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISDRA
FKDLSNLRYLNLGMCNLKEIPNILPLIKLEELEMSGNQISVIKPSSFTGLGNLQKVWMMH
AQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLHHNPWNCNCDILWL
SWWLKEAVPANTSCCARCHTPAAFKGRYIGELDHSYFQCDVPVILEPPSDLNVTEGMGAE
LKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGSLNFTSVTMQDTGTYTCMVSNTAG
NISASAVLNVTSVENSGVTYFTTVTVETIDTPGDDSQTPLPPFGWVSSSTTKSTPISTRT
TERTYTIPVLNVDEEGVPNGLDEVMKTTKIIIGCFVAITLMAAVLLVIFYKMRKQHNQQD
PDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHHTPMLSTIHSSATQ
EPLLIQACSKDNVQETQI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcctaggctgaagggggcgctgtccaaccccctccttgtgctgctcttggcc
cttcagatcctggtggtggccgggctggttcgtgctcaaacctgtccttctgtctgctca
tgcagcaaccagttcagcaaagtcatatgcactcgccgcagtctgcgcgatgtcccagac
ggaatctccaccaacacccgctacttgaatctccaagacaacctcattcaggtcatcaag
gtggacagttttaaacatctgcggcacctggagatactgcaactcagcaaaaaccatatc
cgcaacattgaaattggagctttcaatgggctggccagtctgaacactttggagctcttc
gataatcggctcacgacaatccctaatggagcattcgagtacttgtcaaagttaaaggaa
ttgtggctacggaacaaccccatcgaaagtataccgtcctatgccttcaatcgggttccc
tcgcttcgaagactggatttgggtgagctcaaacgcctctcctacatttccgacagggcc
ttcaaggacttgagcaacctccgctacctgaaccttggaatgtgtaaccttaaggagatc
cctaatatccttcctttgattaagcttgaagagctagaaatgtcaggaaatcagatctct
gttatcaaacccagctcgttcacaggactggggaacctccagaaggtgtggatgatgcac
gctcagatccaaactattgagaggaattcctttgacgaccttcagtcactggtggagctc
aacctggctcacaacaacctcactttcctgccacacgacctctttacgccactgcatcgt
ctcgagcgagtccacctccatcacaacccttggaactgcaactgtgacatcttgtggctc
agctggtggctgaaggaggccgtgcctgccaatacgagctgctgtgcccgctgccatact
cctgcagccttcaaaggtcgctacatcggtgaactggaccacagctacttccagtgcgat
gtcccggtcatcctggagccacccagtgacttaaacgtgacagagggcatgggcgcagag
ctcaagtgtcggacaagctcactgacgtctatcagctggctcacaccaaacggctcattg
gtgacacacggggcttataaagtacgtttgtctgtacttaacgacgggagcctgaacttc
actagtgtcaccatgcaggacaccggaacttacacctgtatggttagcaacacggccggc
aacatttctgcatctgcggtacttaatgtcacttccgtggaaaacagtggggtgacctat
ttcacgacagtcactgtggagaccattgacacccccggggatgacagccaaacaccccta
ccaccatttggctgggtgtcgtcctcgacaacaaaaagtactcccatttctacaaggacc
acagagaggacttacacaattccagttctcaatgtggatgaagaaggagttcccaatggc
ctggatgaggtgatgaaaaccactaaaattattattggctgctttgtggccatcaccctt
atggctgcagttctgctggtcatcttctacaagatgagaaagcaacataaccagcaagac
ccagatggccctgcctcctccatggaggtcattactgttgaagaagagctcgcgggtgtt
gctgccatggagagacacctatcactgccccctctggagcactacaaccattacaacacc
tacaagagcacctaccatcacaccccaatgctcagtaccatacacagttcagcaacgcag
gaacctttactgattcaggcctgctcaaaagacaatgtacaagagacccagatc
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